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Protein
Submitted name:

Chloride channel CLIC-like 1, isoform CRA_a

Gene

Clcc1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. chloride channel activity Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Chloride channel CLIC-like 1, isoform CRA_aImported
Submitted name:
Chloride channel CLIC-like protein 1Imported
Gene namesi
Name:Clcc1Imported
ORF Names:mCG_4070Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 3

Organism-specific databases

MGIiMGI:2385186. Clcc1.

Subcellular locationi

GO - Cellular componenti

  1. endoplasmic reticulum Source: MGI
  2. Golgi apparatus Source: Ensembl
  3. intracellular membrane-bounded organelle Source: MGI
  4. membrane Source: MGI
  5. nucleus Source: Ensembl
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000016611.
HOGENOMiHOG000231351.
HOVERGENiHBG060364.
OMAiSWTYKDD.
OrthoDBiEOG7B8S3V.
TreeFamiTF328890.

Family and domain databases

InterProiIPR009231. Chloride_chnl_CLIC-like.
[Graphical view]
PfamiPF05934. MCLC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A2AEM2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MALFRMLCRL LLCECLLLIT GYAHDDDWID PTDMLNYDAA SGTMRKSQVR
60 70 80 90 100
SGTSEKKEVS PDSSEAEELS DCLHRLDSLT HKVDSCEKKK MKDYESQSNP
110 120 130 140 150
VFRRYLNKIL IEAGKLGLPD ENKVEMRYDA EILLSRQTLL EIQKFLSGEE
160 170 180 190 200
WKPGALDDAL SDILINFKCH DSEAWKWQFE DYFGVDPYNV FMVLLCLLCL
210 220 230 240 250
VVLVATELWT YVRWYTQMKR IFIISFLLSL AWNWIYLYKM AFAQHQANIA
260 270 280 290 300
GMEPFDNLCA KKMDWTGSLW EWFTSSWTYK DDPCQKYYEL LIVNPIWLVP
310 320 330 340 350
PTKALAITFT NFVTEPLKHI GKGAGEFIKA LMKEIPVLLQ IPVLAILALA
360 370 380 390 400
VLSFCYGAGR SVPMLRHFGG PDREPPRALE PDDRRRQKGL DYRLHGGAGD
410 420 430 440 450
ADFSYRGPAG SIEQGPYDKM HASKRDALRQ RFHSGNKSPE VLRAFDLPDT
460 470 480 490 500
EAQEHPEVVP SHKSPIMNTN LETGELPGES TPTEYSQSAK DVSGQVPSAG
510 520 530 540
KSSPTVDKAQ LKTDSECSPP GGCPPSKEAA VAAHGTEPVS SPCG
Length:544
Mass (Da):61,240
Last modified:February 20, 2007 - v1
Checksum:i36ED907AB5EE1B42
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL671917 Genomic DNA. No translation available.
AL683823 Genomic DNA. No translation available.
CH466607 Genomic DNA. Translation: EDL01978.1.
CH466607 Genomic DNA. Translation: EDL01981.1.
RefSeqiNP_001171241.1. NM_001177770.1.
UniGeneiMm.214545.

Genome annotation databases

EnsembliENSMUST00000106613; ENSMUSP00000102224; ENSMUSG00000027884.
GeneIDi229725.
KEGGimmu:229725.
UCSCiuc008qzn.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL671917 Genomic DNA. No translation available.
AL683823 Genomic DNA. No translation available.
CH466607 Genomic DNA. Translation: EDL01978.1.
CH466607 Genomic DNA. Translation: EDL01981.1.
RefSeqiNP_001171241.1. NM_001177770.1.
UniGeneiMm.214545.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000106613; ENSMUSP00000102224; ENSMUSG00000027884.
GeneIDi229725.
KEGGimmu:229725.
UCSCiuc008qzn.2. mouse.

Organism-specific databases

CTDi23155.
MGIiMGI:2385186. Clcc1.

Phylogenomic databases

GeneTreeiENSGT00390000016611.
HOGENOMiHOG000231351.
HOVERGENiHBG060364.
OMAiSWTYKDD.
OrthoDBiEOG7B8S3V.
TreeFamiTF328890.

Miscellaneous databases

ChiTaRSiClcc1. mouse.
NextBioi379649.
SOURCEiSearch...

Family and domain databases

InterProiIPR009231. Chloride_chnl_CLIC-like.
[Graphical view]
PfamiPF05934. MCLC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome."
    Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W.
    , Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.
    Science 296:1661-1671(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: MixedImported.
  2. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
    Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: MixedImported.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  4. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiA2AEM2_MOUSE
AccessioniPrimary (citable) accession number: A2AEM2
Entry historyi
Integrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: February 4, 2015
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.