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Protein
Submitted name:

Chloride channel protein ClC-Ka

Gene

Clcnka

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Chloride channel protein ClC-KaImported
Gene namesi
Name:ClcnkaImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 4

Organism-specific databases

MGIiMGI:1329026 Clcnka

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei50 – 71HelicalSequence analysisAdd BLAST22
Transmembranei91 – 110HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PRIDEiA2ADB4

Expressioni

Gene expression databases

BgeeiENSMUSG00000033770
ExpressionAtlasiA2ADB4 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliA2ADB4
SMRiA2ADB4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG0476 Eukaryota
COG0038 LUCA
GeneTreeiENSGT00760000119109

Family and domain databases

Gene3Di1.10.3080.10, 1 hit
InterProiView protein in InterPro
IPR014743 Cl-channel_core
IPR001807 Cl-channel_volt-gated
IPR002250 Cl_channel-K
PfamiView protein in Pfam
PF00654 Voltage_CLC, 1 hit
PRINTSiPR00762 CLCHANNEL
PR01119 CLCHANNELKDY
SUPFAMiSSF81340 SSF81340, 1 hit

Sequencei

Sequence statusi: Fragment.

A2ADB4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEELVGLREG SSGKPVTLQE LWGPCPRIRR GIRGGLEWLK ERLFRAREDW
60 70 80 90 100
YFLVALGVLM ALISYAMNFA IGRVVRAHKW LYREVGDGHL LRYLSWTVYP
110 120 130 140 150
VALLSFSSGF SQSITPFSGG SGLPELKTML SGVVLENYLD IKNFGAKVVG
160 170 180 190
LSCTLATGST IFLGKVGPFV HLSVMISAYL GRVRAKAVGD TE
Length:192
Mass (Da):21,173
Last modified:February 20, 2007 - v1
Checksum:iE15C561170D076C5
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei192Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL670285 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSMUST00000133676; ENSMUSP00000122396; ENSMUSG00000033770

Similar proteinsi

Entry informationi

Entry nameiA2ADB4_MOUSE
AccessioniPrimary (citable) accession number: A2ADB4
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: May 23, 2018
This is version 69 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health