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A2ACT7

- A2ACT7_MOUSE

UniProt

A2ACT7 - A2ACT7_MOUSE

Protein
Submitted name:

Procollagen, type IX, alpha 3

Gene

Col9a3

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 61 (01 Oct 2014)
      Sequence version 1 (20 Feb 2007)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. female gonad development Source: UniProtKB
    2. male gonad development Source: UniProtKB

    Enzyme and pathway databases

    ReactomeiREACT_198984. Collagen biosynthesis and modifying enzymes.
    REACT_199055. Collagen degradation.
    REACT_216309. Integrin cell surface interactions.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Procollagen, type IX, alpha 3Imported
    Submitted name:
    Protein Col9a3Imported
    Gene namesi
    Name:Col9a3Imported
    ORF Names:mCG_140084Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 2

    Organism-specific databases

    MGIiMGI:894686. Col9a3.

    Subcellular locationi

    GO - Cellular componenti

    1. collagen type IX trimer Source: Ensembl

    Family & Domainsi

    Keywords - Domaini

    CollagenImported

    Phylogenomic databases

    eggNOGiNOG297550.
    GeneTreeiENSGT00750000117472.
    HOGENOMiHOG000085653.
    HOVERGENiHBG004933.
    InParanoidiA2ACT7.
    KOiK08131.
    OMAiTGHKGEP.
    OrthoDBiEOG7J180G.

    Family and domain databases

    InterProiIPR008160. Collagen.
    [Graphical view]
    PfamiPF01391. Collagen. 9 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A2ACT7-1 [UniParc]FASTAAdd to Basket

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    MTGAPALALL LLGQLLTATS AQKVGPRGPP GPQGPPGKPG KDGIDGEAGP    50
    PGLPGLPGPK GTSGKPGKPG EAGLPGLPGV DGLTGRDGPA GPKGAPGERG 100
    SLGPPGPPGL GGKGLPGPPG EAGVSGLPGG IGLRGPPGPS GLPGLPGLPG 150
    PPGPPGNPGV LPEGATDLQC PAICPPGPPG PPGMPGFKGP TGYKGEQGEV 200
    GKDGEKGSPG PPGPPGIPGT VGLQGPRGLR GLPGPLGPPG DRGPIGFRGP 250
    PGTPGAPGKV GDRGERGPEG FRGPKGDLGR PGPKGIPGMA GPGGEPGMPG 300
    KDGKDGVPGL DGEKGEAGRN GGQGEKGPNG LPGLPGRAGS KGEKGEPGRT 350
    GELGEAGPSG EPGIPGDVGV PGERGEAGHR GSVGALGPQG PPGAPGIRGF 400
    QGQKGSTGDP GLPGPQGLRG DVGDRGPGGA TGPKGDQGIA GSDGLPGDKG 450
    ELGPNGPVGQ KGESGSRGEL GPKGIQGPNG TSGVQGVPGP PGPLGLQGVQ 500
    GVPGITGKPG VPGKEASEQR IRELCGGMIS EQIAQLAAHL RKPLAPGSIG 550
    RPGPAGPPGP PGPPGSIGHP GARGPPGYRG PTGELGDPGP RGSQGDRGDK 600
    GATGAGLDGP AGDQGYQGPQ GVPGISKDGR DGAHGEPGLP GDPGLPGAAG 650
    AQGTPGICDT SACQGAVLGG GGEKSGPRSS 680
    Length:680
    Mass (Da):63,475
    Last modified:February 20, 2007 - v1
    Checksum:iE898FA049A4D9D2E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL669926 Genomic DNA. No translation available.
    CH466626 Genomic DNA. Translation: EDL07344.1.
    RefSeqiNP_034066.2. NM_009936.2.
    XP_006500615.1. XM_006500552.1.
    UniGeneiMm.141312.

    Genome annotation databases

    EnsembliENSMUST00000103059; ENSMUSP00000099348; ENSMUSG00000027570.
    ENSMUST00000132527; ENSMUSP00000128718; ENSMUSG00000027570.
    GeneIDi12841.
    KEGGimmu:12841.
    UCSCiuc008ojl.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL669926 Genomic DNA. No translation available.
    CH466626 Genomic DNA. Translation: EDL07344.1 .
    RefSeqi NP_034066.2. NM_009936.2.
    XP_006500615.1. XM_006500552.1.
    UniGenei Mm.141312.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000103059 ; ENSMUSP00000099348 ; ENSMUSG00000027570 .
    ENSMUST00000132527 ; ENSMUSP00000128718 ; ENSMUSG00000027570 .
    GeneIDi 12841.
    KEGGi mmu:12841.
    UCSCi uc008ojl.1. mouse.

    Organism-specific databases

    CTDi 1299.
    MGIi MGI:894686. Col9a3.

    Phylogenomic databases

    eggNOGi NOG297550.
    GeneTreei ENSGT00750000117472.
    HOGENOMi HOG000085653.
    HOVERGENi HBG004933.
    InParanoidi A2ACT7.
    KOi K08131.
    OMAi TGHKGEP.
    OrthoDBi EOG7J180G.

    Enzyme and pathway databases

    Reactomei REACT_198984. Collagen biosynthesis and modifying enzymes.
    REACT_199055. Collagen degradation.
    REACT_216309. Integrin cell surface interactions.

    Miscellaneous databases

    NextBioi 282372.
    PROi A2ACT7.
    SOURCEi Search...

    Family and domain databases

    InterProi IPR008160. Collagen.
    [Graphical view ]
    Pfami PF01391. Collagen. 9 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome."
      Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W.
      , Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.
      Science 296:1661-1671(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MixedImported.
    2. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
      Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MixedImported.
    3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    4. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiA2ACT7_MOUSE
    AccessioniPrimary (citable) accession number: A2ACT7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 20, 2007
    Last sequence update: February 20, 2007
    Last modified: October 1, 2014
    This is version 61 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3