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A2ACT7

- A2ACT7_MOUSE

UniProt

A2ACT7 - A2ACT7_MOUSE

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Protein
Submitted name: Procollagen, type IX, alpha 3
Gene
Col9a3, mCG_140084
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Biological processi

  1. female gonad development Source: UniProtKB
  2. male gonad development Source: UniProtKB
Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_198984. Collagen biosynthesis and modifying enzymes.
REACT_199055. Collagen degradation.
REACT_216309. Integrin cell surface interactions.

Names & Taxonomyi

Protein namesi
Submitted name:
Procollagen, type IX, alpha 3Imported
Submitted name:
Protein Col9a3Imported
Gene namesi
Name:Col9a3Imported
ORF Names:mCG_140084Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 2

Organism-specific databases

MGIiMGI:894686. Col9a3.

Subcellular locationi

GO - Cellular componenti

  1. collagen type IX trimer Source: Ensembl
Complete GO annotation...

Family & Domainsi

Keywords - Domaini

CollagenImported

Phylogenomic databases

eggNOGiNOG297550.
GeneTreeiENSGT00750000117472.
HOGENOMiHOG000085653.
HOVERGENiHBG004933.
InParanoidiA2ACT7.
KOiK08131.
OMAiTGHKGEP.
OrthoDBiEOG7J180G.

Family and domain databases

InterProiIPR008160. Collagen.
[Graphical view]
PfamiPF01391. Collagen. 9 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A2ACT7-1 [UniParc]FASTAAdd to Basket

« Hide

MTGAPALALL LLGQLLTATS AQKVGPRGPP GPQGPPGKPG KDGIDGEAGP    50
PGLPGLPGPK GTSGKPGKPG EAGLPGLPGV DGLTGRDGPA GPKGAPGERG 100
SLGPPGPPGL GGKGLPGPPG EAGVSGLPGG IGLRGPPGPS GLPGLPGLPG 150
PPGPPGNPGV LPEGATDLQC PAICPPGPPG PPGMPGFKGP TGYKGEQGEV 200
GKDGEKGSPG PPGPPGIPGT VGLQGPRGLR GLPGPLGPPG DRGPIGFRGP 250
PGTPGAPGKV GDRGERGPEG FRGPKGDLGR PGPKGIPGMA GPGGEPGMPG 300
KDGKDGVPGL DGEKGEAGRN GGQGEKGPNG LPGLPGRAGS KGEKGEPGRT 350
GELGEAGPSG EPGIPGDVGV PGERGEAGHR GSVGALGPQG PPGAPGIRGF 400
QGQKGSTGDP GLPGPQGLRG DVGDRGPGGA TGPKGDQGIA GSDGLPGDKG 450
ELGPNGPVGQ KGESGSRGEL GPKGIQGPNG TSGVQGVPGP PGPLGLQGVQ 500
GVPGITGKPG VPGKEASEQR IRELCGGMIS EQIAQLAAHL RKPLAPGSIG 550
RPGPAGPPGP PGPPGSIGHP GARGPPGYRG PTGELGDPGP RGSQGDRGDK 600
GATGAGLDGP AGDQGYQGPQ GVPGISKDGR DGAHGEPGLP GDPGLPGAAG 650
AQGTPGICDT SACQGAVLGG GGEKSGPRSS 680
Length:680
Mass (Da):63,475
Last modified:February 20, 2007 - v1
Checksum:iE898FA049A4D9D2E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL669926 Genomic DNA. No translation available.
CH466626 Genomic DNA. Translation: EDL07344.1.
RefSeqiNP_034066.2. NM_009936.2.
XP_006500615.1. XM_006500552.1.
UniGeneiMm.141312.

Genome annotation databases

EnsembliENSMUST00000103059; ENSMUSP00000099348; ENSMUSG00000027570.
ENSMUST00000132527; ENSMUSP00000128718; ENSMUSG00000027570.
GeneIDi12841.
KEGGimmu:12841.
UCSCiuc008ojl.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL669926 Genomic DNA. No translation available.
CH466626 Genomic DNA. Translation: EDL07344.1 .
RefSeqi NP_034066.2. NM_009936.2.
XP_006500615.1. XM_006500552.1.
UniGenei Mm.141312.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000103059 ; ENSMUSP00000099348 ; ENSMUSG00000027570 .
ENSMUST00000132527 ; ENSMUSP00000128718 ; ENSMUSG00000027570 .
GeneIDi 12841.
KEGGi mmu:12841.
UCSCi uc008ojl.1. mouse.

Organism-specific databases

CTDi 1299.
MGIi MGI:894686. Col9a3.

Phylogenomic databases

eggNOGi NOG297550.
GeneTreei ENSGT00750000117472.
HOGENOMi HOG000085653.
HOVERGENi HBG004933.
InParanoidi A2ACT7.
KOi K08131.
OMAi TGHKGEP.
OrthoDBi EOG7J180G.

Enzyme and pathway databases

Reactomei REACT_198984. Collagen biosynthesis and modifying enzymes.
REACT_199055. Collagen degradation.
REACT_216309. Integrin cell surface interactions.

Miscellaneous databases

NextBioi 282372.
PROi A2ACT7.
SOURCEi Search...

Family and domain databases

InterProi IPR008160. Collagen.
[Graphical view ]
Pfami PF01391. Collagen. 9 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome."
    Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W.
    , Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.
    Science 296:1661-1671(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: MixedImported.
  2. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
    Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: MixedImported.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  4. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiA2ACT7_MOUSE
AccessioniPrimary (citable) accession number: A2ACT7
Entry historyi
Integrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: September 3, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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