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A2A931

- A2A931_MOUSE

UniProt

A2A931 - A2A931_MOUSE

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Protein
Submitted name: PR domain zinc finger protein 16
Gene
Prdm16
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. SMAD binding Source: MGI
  2. metal ion binding Source: InterPro
  3. nucleic acid binding Source: InterPro

GO - Biological processi

  1. negative regulation of transforming growth factor beta receptor signaling pathway Source: MGI
  2. neurogenesis Source: MGI
  3. palate development Source: MGI
  4. somatic stem cell maintenance Source: MGI
  5. tongue development Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
PR domain zinc finger protein 16Imported
Gene namesi
Name:Prdm16Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 4

Organism-specific databases

MGIiMGI:1917923. Prdm16.

PTM / Processingi

Proteomic databases

PRIDEiA2A931.

Structurei

3D structure databases

ProteinModelPortaliA2A931.
SMRiA2A931. Positions 25-209, 228-494, 946-1056.

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation

Phylogenomic databases

GeneTreeiENSGT00530000063676.
HOGENOMiHOG000231144.
HOVERGENiHBG005619.

Family and domain databases

Gene3Di3.30.160.60. 8 hits.
InterProiIPR001214. SET_dom.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamiPF00096. zf-C2H2. 4 hits.
[Graphical view]
SMARTiSM00317. SET. 1 hit.
SM00355. ZnF_C2H2. 10 hits.
[Graphical view]
PROSITEiPS50280. SET. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 8 hits.
PS50157. ZINC_FINGER_C2H2_2. 10 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A2A931-1 [UniParc]FASTAAdd to Basket

« Hide

MRSKARARKL AKSDGDVVNN MYEPDPDLLA GQSAEEETED GILSPIPMGP     50
PSPFPTSEDF TPKEGSPYEA PVYIPEDIPI PPDFELRESS IPGAGLGIWA 100
KRKMEIGERF GPYVVTPRAA LKEADFGWEM LTDTEVSSQE SCIKKISEDL 150
GSEKFCVDAN QAGSGSWLKY IRVACSCDDQ NLAMCQINEQ IYYKVIKDIE 200
PGEELLVHVK EGAYSLGVMA PSLDEDPTFR CDECDELFQC RLDLRRHKKY 250
ACSSAGAQLY EGLGEELKPE GLGVGSDGQA HECKDCERMF PNKYSLEQHM 300
IVHTEEREYK CDQCPKAFNW KSNLIRHQMS HDSGKRFECE NCVKVFTDPS 350
NLQRHIRSQH VGARAHACPD CGKTFATSSG LKQHKHIHST VKPFICEVCH 400
KSYTQFSNLC RHKRMHADCR TQIKCKDCGQ MFSTTSSLNK HRRFCEGKNH 450
YTPGSIFTPG LPLTPSPMMD KTKPSPTLNH GGLGFSEYFP SRPHPGSLPF 500
SAAPPAFPAL TPGFPGIFPP SLYPRPPLLP PTPLLKSPLN HAQDAKLPSP 550
LGNPALPLVS AVSNSSQGAT AATGSEEKFD GRLEDAYAEK VKNRSPDMSD 600
GSDFEDINTT TGTDLDTTTG TGSDLDSDLD SDRDKGKDKG KPVESKPEFG 650
GASVPPGAMN SVAEVPAFYS QHSFFPPPEE QLLTASGAAG DSIKAIASIA 700
EKYFGPGFMS MQEKKLGSLP YHSVFPFQFL PNFPHSLYPF TDRALAHNLL 750
VKAEPKSPRD ALKVGGPSAE CPFDLTTKPK EAKPALLAPK VPLIPSSGEE 800
QPLDLSIGSR ARASQNGGGR EPRKNHVYGE RKPGVSEGLP KVCPAQLPQQ 850
PSLHYAKPSP FFMDPIYRVE KRKVADPVGV LKEKYLRPSP LLFHPQMSAI 900
ETMTEKLESF AAMKADSGSS LQPLPHHPFN FRSPPPTLSD PILRKGKERY 950
TCRYCGKIFP RSANLTRHLR THTGEQPYRC KYCDRSFSIS SNLQRHVRNI 1000
HNKEKPFKCH LCNRCFGQQT NLDRHLKKHE HEGAPVSQHS GVLTNHLGTS 1050
ASSPTSESDN HALLDEKEDS YFSEIRNFIA NSEMNQASTR MDKRPEIQDL 1100
DSNPPCPGSA SAKPEDVEEE EEEELEEEDD DSLAGKSQED TVSPTPEPQG 1150
VYEDEEDEEP PSLTMGFDHT RRCVEERGGG LLALEPTPTF GKGLDLRRAA 1200
EEAFEVKDVL NSTLDSEVLK QTLYRQAKNQ AYAMMLSLSE DTPLHAPSQS 1250
SLDAWLNITG PSSESGAFNP INHL 1274
Length:1,274
Mass (Da):140,730
Last modified:February 5, 2008 - v1
Checksum:i9039EC0F8EC748BD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL611950 Genomic DNA. No translation available.
AL627123 Genomic DNA. No translation available.
AL627127 Genomic DNA. No translation available.
AL627226 Genomic DNA. No translation available.
RefSeqiNP_001277955.1. NM_001291026.1.
UniGeneiMm.257785.

Genome annotation databases

EnsembliENSMUST00000105637; ENSMUSP00000101262; ENSMUSG00000039410.
GeneIDi70673.
UCSCiuc008wbv.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL611950 Genomic DNA. No translation available.
AL627123 Genomic DNA. No translation available.
AL627127 Genomic DNA. No translation available.
AL627226 Genomic DNA. No translation available.
RefSeqi NP_001277955.1. NM_001291026.1.
UniGenei Mm.257785.

3D structure databases

ProteinModelPortali A2A931.
SMRi A2A931. Positions 25-209, 228-494, 946-1056.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi A2A931.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000105637 ; ENSMUSP00000101262 ; ENSMUSG00000039410 .
GeneIDi 70673.
UCSCi uc008wbv.1. mouse.

Organism-specific databases

MGIi MGI:1917923. Prdm16.

Phylogenomic databases

GeneTreei ENSGT00530000063676.
HOGENOMi HOG000231144.
HOVERGENi HBG005619.

Miscellaneous databases

ChiTaRSi PRDM16. mouse.
NextBioi 35542853.
SOURCEi Search...

Family and domain databases

Gene3Di 3.30.160.60. 8 hits.
InterProi IPR001214. SET_dom.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view ]
Pfami PF00096. zf-C2H2. 4 hits.
[Graphical view ]
SMARTi SM00317. SET. 1 hit.
SM00355. ZnF_C2H2. 10 hits.
[Graphical view ]
PROSITEi PS50280. SET. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 8 hits.
PS50157. ZINC_FINGER_C2H2_2. 10 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiA2A931_MOUSE
AccessioniPrimary (citable) accession number: A2A931
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: September 3, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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