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Protein
Submitted name:

PR domain zinc finger protein 16

Gene

Prdm16

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
PR domain zinc finger protein 16Imported
Gene namesi
Name:Prdm16Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 4

Organism-specific databases

MGIiMGI:1917923 Prdm16

PTM / Processingi

Proteomic databases

PeptideAtlasiA2A929

Expressioni

Gene expression databases

BgeeiENSMUSG00000039410
ExpressionAtlasiA2A929 baseline and differential

Structurei

3D structure databases

SMRiA2A929
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini82 – 210SETInterPro annotationAdd BLAST129

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00900000140928
HOVERGENiHBG031707

Family and domain databases

InterProiView protein in InterPro
IPR026710 MDS1
IPR001214 SET_dom
PANTHERiPTHR21652 PTHR21652, 1 hit
PfamiView protein in Pfam
PF00856 SET, 1 hit
SMARTiView protein in SMART
SM00317 SET, 1 hit
PROSITEiView protein in PROSITE
PS50280 SET, 1 hit

Sequencei

Sequence statusi: Fragment.

A2A929-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRSKARARKL AKSDGDVVNN MYEPDPDLLA GQSAEEETED GILSPIPMGP
60 70 80 90 100
PSPFPTSEDF TPKEGSPYEA PVYIPEDIPI PPDFELRESS IPGAGLGIWA
110 120 130 140 150
KRKMEIGERF GPYVVTPRAA LKEADFGWEM LTDTEVSSQE SCIKKISEDL
160 170 180 190 200
GSEKFCVDAN QAGSGSWLKY IRVACSCDDQ NLAMCQINEQ IYYKVIKDIE
210
PGEELLVHVK EGAY
Length:214
Mass (Da):23,655
Last modified:February 5, 2008 - v1
Checksum:iD533826A2D227E3A
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei214Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL611950 Genomic DNA No translation available.
AL627123 Genomic DNA No translation available.
AL627127 Genomic DNA No translation available.
AL627226 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSMUST00000124771; ENSMUSP00000117598; ENSMUSG00000039410

Similar proteinsi

Entry informationi

Entry nameiA2A929_MOUSE
AccessioniPrimary (citable) accession number: A2A929
Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: April 25, 2018
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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Main funding by: National Institutes of Health