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A2A929

- A2A929_MOUSE

UniProt

A2A929 - A2A929_MOUSE

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Protein
Submitted name:

PR domain zinc finger protein 16

Gene

Prdm16

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. SMAD binding Source: MGI

GO - Biological processi

  1. negative regulation of transforming growth factor beta receptor signaling pathway Source: MGI
  2. neurogenesis Source: MGI
  3. palate development Source: MGI
  4. somatic stem cell maintenance Source: MGI
  5. tongue development Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
PR domain zinc finger protein 16Imported
Gene namesi
Name:Prdm16Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 4

Organism-specific databases

MGIiMGI:1917923. Prdm16.

Expressioni

Gene expression databases

ExpressionAtlasiA2A929. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliA2A929.
SMRiA2A929. Positions 27-212.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation
Contains SET domain.SAAS annotation

Phylogenomic databases

GeneTreeiENSGT00530000063676.
HOVERGENiHBG031707.

Family and domain databases

InterProiIPR001214. SET_dom.
[Graphical view]
PfamiPF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00317. SET. 1 hit.
[Graphical view]
PROSITEiPS50280. SET. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

A2A929-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRSKARARKL AKSDGDVVNN MYEPDPDLLA GQSAEEETED GILSPIPMGP
60 70 80 90 100
PSPFPTSEDF TPKEGSPYEA PVYIPEDIPI PPDFELRESS IPGAGLGIWA
110 120 130 140 150
KRKMEIGERF GPYVVTPRAA LKEADFGWEM LTDTEVSSQE SCIKKISEDL
160 170 180 190 200
GSEKFCVDAN QAGSGSWLKY IRVACSCDDQ NLAMCQINEQ IYYKVIKDIE
210
PGEELLVHVK EGAY
Length:214
Mass (Da):23,655
Last modified:February 5, 2008 - v1
Checksum:iD533826A2D227E3A
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei214 – 2141Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL611950 Genomic DNA. No translation available.
AL627123 Genomic DNA. No translation available.
AL627127 Genomic DNA. No translation available.
AL627226 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000124771; ENSMUSP00000117598; ENSMUSG00000039410.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL611950 Genomic DNA. No translation available.
AL627123 Genomic DNA. No translation available.
AL627127 Genomic DNA. No translation available.
AL627226 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali A2A929.
SMRi A2A929. Positions 27-212.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000124771 ; ENSMUSP00000117598 ; ENSMUSG00000039410 .

Organism-specific databases

MGIi MGI:1917923. Prdm16.

Phylogenomic databases

GeneTreei ENSGT00530000063676.
HOVERGENi HBG031707.

Miscellaneous databases

ChiTaRSi Prdm16. mouse.
NextBioi 35542851.
SOURCEi Search...

Gene expression databases

ExpressionAtlasi A2A929. baseline and differential.

Family and domain databases

InterProi IPR001214. SET_dom.
[Graphical view ]
Pfami PF00856. SET. 1 hit.
[Graphical view ]
SMARTi SM00317. SET. 1 hit.
[Graphical view ]
PROSITEi PS50280. SET. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiA2A929_MOUSE
AccessioniPrimary (citable) accession number: A2A929
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: November 26, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3