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A2A7B5

- A2A7B5_MOUSE

UniProt

A2A7B5 - A2A7B5_MOUSE

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Protein
Submitted name: Protein Prdm2
Gene
Prdm2
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. metal ion binding Source: InterPro

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Prdm2Imported
Gene namesi
Name:Prdm2Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 4

Organism-specific databases

MGIiMGI:107628. Prdm2.

Subcellular locationi

GO - Cellular componenti

  1. Golgi apparatus Source: Ensembl
  2. nucleus Source: Ensembl
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiA2A7B5.
PRIDEiA2A7B5.

Expressioni

Gene expression databases

ArrayExpressiA2A7B5.

Structurei

3D structure databases

ProteinModelPortaliA2A7B5.
SMRiA2A7B5. Positions 1-160.

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation
Contains SET domain.SAAS annotations

Phylogenomic databases

eggNOGiNOG258873.
GeneTreeiENSGT00730000111050.
HOGENOMiHOG000231078.
HOVERGENiHBG053671.
InParanoidiA2A7B5.
KOiK11432.
OMAiTHTNMRR.
OrthoDBiEOG7NW68B.
PhylomeDBiA2A7B5.
TreeFamiTF332173.

Family and domain databases

Gene3Di3.30.160.60. 1 hit.
InterProiIPR009170. RIZ_retinblastoma-bd_prot.
IPR001214. SET_dom.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamiPF00856. SET. 1 hit.
PF00096. zf-C2H2. 2 hits.
[Graphical view]
PIRSFiPIRSF002395. RIZ_SET. 1 hit.
SMARTiSM00317. SET. 1 hit.
SM00355. ZnF_C2H2. 8 hits.
[Graphical view]
PROSITEiPS50280. SET. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 6 hits.
PS50157. ZINC_FINGER_C2H2_2. 7 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A2A7B5-1 [UniParc]FASTAAdd to Basket

« Hide

MHQNTESVAV TETLAEVPEH VLRGLPEEVR LLPSAVDKTR IGVWATKPIL     50
KGKKFGPFVG DKKKRSQVRN NVYMWEVYYP NLGWMCIDAT DPEKGNWLRY 100
VNWACSGEEQ NLFPLEINRA IYYKTLKPIA PGEELLVWYN GEDNPEIAAA 150
IEEERASARS KRSSPKSRRG KKKSQENKNK GVRTQAAARK ASELDSTSAN 200
MRGSAEGPKE EDERPLASAP EQPALLPEVV SQDAVPQVAI PLPACESQPG 250
ADGKQEVTDC EVNNMKEEEE EEEEELEEEE EEEELGEDGE EEADMPNESS 300
VKEPEIRCEE KPEDLLEEPR SVPTETSEGS PGATPPPHAP RAREEANGEG 350
LETFMFPCQH CERKFATKQG LERHMHIHIS TINHAFKCKY CGKPFGTQIN 400
RRRHERRHET GLKRRPSMAL QSSEDPDDGK GENVTSKDES SPPQLGQDCL 450
ILNSEKTSQE ILNSSFVEEN GEVKELHPCK YCKKVFGTHT NMRRHQRRVH 500
ERHLIPKGVR RKGGLLEEPQ PPAEQAPPSQ NVYVPSTEPE EDGDADDVYI 550
MDISSNISEN LNYYIDGKIQ TNNSTSDCDV IEMESNSAHL YGIDCLLTPV 600
TVEITQNIKS TQGSVTDDLL KESPSSTNCE SKKRRTASPP VLPKIKAETD 650
SDSTAPSCSL SLPLSISTTE VVSFHKEKGV YLSSKLKQLL QTQDKLTPPA 700
GISTAEIPKL GPVCVSAPAS MLAVTSSRFK RRTSSPPSSP QHSPALRDFG 750
KQSDGKAAWT DTALTSKKPK LESRSDSPAW SLSGRDERET GSPPCFDEYK 800
ISKEWAASST FSSVCNQQPL DLSSGVKQKS EGTGKTPVPW ESVLDLSVHK 850
KPCDSEGKEF KENHLAQPAA KKKKPTTCML QKVLLNEYNG VSLPTESTPE 900
ATRSPSPCKS PDTQPDPELA TDSSCSAPTA ESPPEVVGPS SPPLQAASLS 950
SGQLPPLLIP TEPSSPPPCP PVLTVATPPP PLLPTVPLPN PSCDASPQQC 1000
PSPFSNATAQ SPLPILSPTV SPSPSPIPPV EPLMSAASPG PPTLSSSSSS 1050
SSSSSFSSSS CSSSSPSPPP LSAVSSVVSS GDNLEASLPA ITLKQEESES 1100
EGLKRKEEAP AAGGQSAVQE TFSRNFVCNV CASPFLSIKD LTKHLSVHAE 1150
EWPFKCEFCV QLFKGKTDLS EHRFLLHGVG NIFVCSVCKK EFAFLCNLQQ 1200
HQRDLHPDEL CTHHEFESGT LRPQNFTDPS KAHVEHMPSL PEEPAEASRE 1250
EELNDSSEEL YTTIKIMASG IKTKEPDVRL GLNQHYPSFK PPPFQYHHRN 1300
PMGIGVTATN FTTHNIPQTF TTAIRCTKCG KSVDNMPELH KHILACASAS 1350
DKKRYTPKKN PVPLRQTVQP KNGVLVLDNS GKNAFRRMGQ PKRLSFNVEL 1400
SKMSPNKLKL NALKKKNQLV QKAILQKNRS AKQKADLRDT SEASSHICPY 1450
CDREFTYIGS LNKHAAFSCP KKPLSPSKRK VSHSSKKGGH TSSASSDRNS 1500
SSNPRRRTAD TEIKMQSMQA PLGKTRARST GPAQASLPSS SFRSRQNVKF 1550
AASVKSKKAS SSSLRNSSPV RMAKITHVEG KKSKAVAKSH STQLSSKASR 1600
SLHVKVQKSK AVLQSKTALA SKKRTDRFIV KSRERSGGPI TRSLQLAAAA 1650
DLSESRREDS SARHELKDLS YSLRLASRCA SSTAPYITRQ CRKVKAAAAT 1700
QFQGPFFKE 1709
Length:1,709
Mass (Da):187,203
Last modified:February 20, 2007 - v1
Checksum:iF719B0D1A70DE1B2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL606915 Genomic DNA. No translation available.
RefSeqiNP_001074824.3. NM_001081355.3.
UniGeneiMm.332020.

Genome annotation databases

EnsembliENSMUST00000105778; ENSMUSP00000101404; ENSMUSG00000057637.
GeneIDi110593.
KEGGimmu:110593.
UCSCiuc012doh.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL606915 Genomic DNA. No translation available.
RefSeqi NP_001074824.3. NM_001081355.3.
UniGenei Mm.332020.

3D structure databases

ProteinModelPortali A2A7B5.
SMRi A2A7B5. Positions 1-160.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PaxDbi A2A7B5.
PRIDEi A2A7B5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000105778 ; ENSMUSP00000101404 ; ENSMUSG00000057637 .
GeneIDi 110593.
KEGGi mmu:110593.
UCSCi uc012doh.1. mouse.

Organism-specific databases

CTDi 7799.
MGIi MGI:107628. Prdm2.

Phylogenomic databases

eggNOGi NOG258873.
GeneTreei ENSGT00730000111050.
HOGENOMi HOG000231078.
HOVERGENi HBG053671.
InParanoidi A2A7B5.
KOi K11432.
OMAi THTNMRR.
OrthoDBi EOG7NW68B.
PhylomeDBi A2A7B5.
TreeFami TF332173.

Miscellaneous databases

ChiTaRSi PRDM2. mouse.
NextBioi 364293.
PROi A2A7B5.
SOURCEi Search...

Gene expression databases

ArrayExpressi A2A7B5.

Family and domain databases

Gene3Di 3.30.160.60. 1 hit.
InterProi IPR009170. RIZ_retinblastoma-bd_prot.
IPR001214. SET_dom.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view ]
Pfami PF00856. SET. 1 hit.
PF00096. zf-C2H2. 2 hits.
[Graphical view ]
PIRSFi PIRSF002395. RIZ_SET. 1 hit.
SMARTi SM00317. SET. 1 hit.
SM00355. ZnF_C2H2. 8 hits.
[Graphical view ]
PROSITEi PS50280. SET. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 6 hits.
PS50157. ZINC_FINGER_C2H2_2. 7 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  3. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiA2A7B5_MOUSE
AccessioniPrimary (citable) accession number: A2A7B5
Entry historyi
Integrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: July 9, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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