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Protein
Submitted name:

Double-stranded RNA-binding protein Staufen homolog 1

Gene

Stau1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Double-stranded RNA-binding protein Staufen homolog 1Imported
Gene namesi
Name:Stau1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:1338864. Stau1.

PTM / Processingi

Proteomic databases

MaxQBiA2A5R8.
PaxDbiA2A5R8.
PeptideAtlasiA2A5R8.
PRIDEiA2A5R8.

Expressioni

Gene expression databases

BgeeiENSMUSG00000039536.
ExpressionAtlasiA2A5R8. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliA2A5R8.
SMRiA2A5R8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini96 – 163DRBMInterPro annotationAdd BLAST68
Domaini198 – 266DRBMInterPro annotationAdd BLAST69

Phylogenomic databases

eggNOGiKOG3732. Eukaryota.
ENOG410XSCK. LUCA.
GeneTreeiENSGT00900000140998.
HOGENOMiHOG000231025.
HOVERGENiHBG005013.

Family and domain databases

InterProiView protein in InterPro
IPR014720. dsRBD_dom.
IPR032478. Staufen_C.
PfamiView protein in Pfam
PF00035. dsrm. 2 hits.
PF16482. Staufen_C. 1 hit.
SMARTiView protein in SMART
SM00358. DSRM. 2 hits.
PROSITEiView protein in PROSITE
PS50137. DS_RBD. 2 hits.

Sequencei

Sequence statusi: Complete.

A2A5R8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYKPVDPHSR MQSTYSYGMR GGAYPPRYFY PFPVPPLLYQ VELSVGGQQF
60 70 80 90 100
NGKGKMRPPV KHDAPARALR TLQSEPLPER LEVNGREAEE ENLNKSEISQ
110 120 130 140 150
VFEIALKRNL PVNFEVARES GPPHMKNFVT RVSVGEFVGE GEGKSKKISK
160 170 180 190 200
KNAARAVLEQ LRRLPPLPAV ERVKPRIKKK SQPTCKLQTA PDYGQGMNPI
210 220 230 240 250
SRLAQIQQAK KEKEPEYMLL TERGLPRRRE FVMQVKVGHH TAEGVGTNKK
260 270 280 290 300
VAKRNAAENM LEILGFKVPQ AQPAKPALKS EEKTPVKKPG DGRKVTFFEP
310 320 330 340 350
SPGDENGTSN KDEEFRMPYL SHQQLPAGIL PMVPEVAQAV GVSQGHHTKD
360 370 380 390 400
FTRAAPNPAK ATVTAMIARE LLYGGTSPTA ETILKSNISS GHVPHGPRTR
410 420 430 440 450
PSEQLYYLSR AQGFQVEYKD FPKNNKNECV SLINCSSQPP LVSHGIGKDV
460 470 480
ESCHDMAALN ILKLLSELDQ QSTEMPRTGN GPVSA
Length:485
Mass (Da):53,747
Last modified:February 20, 2007 - v1
Checksum:i5C7D880DC3105EB9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL591711 Genomic DNA. No translation available.
RefSeqiNP_001278089.1. NM_001291160.1.
UniGeneiMm.73276.

Genome annotation databases

EnsembliENSMUST00000049412; ENSMUSP00000042626; ENSMUSG00000039536.
GeneIDi20853.
UCSCiuc008nyx.3. mouse.

Similar proteinsi

Entry informationi

Entry nameiA2A5R8_MOUSE
AccessioniPrimary (citable) accession number: A2A5R8
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: October 25, 2017
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported