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Protein
Submitted name:

Voltage-dependent L-type calcium channel subunit beta-1

Gene

Cacnb1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Voltage-dependent L-type calcium channel subunit beta-1Imported
Gene namesi
Name:Cacnb1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:102522. Cacnb1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PeptideAtlasiA2A542.
PRIDEiA2A542.

PTM databases

iPTMnetiA2A542.

Expressioni

Gene expression databases

BgeeiA2A542.
ExpressionAtlasiA2A542. baseline and differential.
GenevisibleiA2A542. MM.

Structurei

3D structure databases

ProteinModelPortaliA2A542.
SMRiA2A542. Positions 11-127, 205-415.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini53 – 11462SH3InterPro annotationAdd
BLAST

Sequence similaritiesi

Contains SH3 domain.SAAS annotation

Keywords - Domaini

SH3 domainSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00390000002740.
HOGENOMiHOG000230979.
HOVERGENiHBG050765.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR008145. GK/Ca_channel_bsu.
IPR027417. P-loop_NTPase.
IPR001452. SH3_domain.
IPR005443. VDCC_L_b1su.
IPR000584. VDCC_L_bsu.
[Graphical view]
PANTHERiPTHR11824. PTHR11824. 2 hits.
PfamiPF00625. Guanylate_kin. 1 hit.
PF12052. VGCC_beta4Aa_N. 1 hit.
[Graphical view]
PRINTSiPR01626. LCACHANNELB.
PR01627. LCACHANNELB1.
SMARTiSM00072. GuKc. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 2 hits.
SSF52540. SSF52540. 1 hit.
PROSITEiPS50002. SH3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A2A542-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEVPSRTLVV GSAESYTSRP SDSDVSLEED REALRKEAER QALAQLEKAK
60 70 80 90 100
TKPVAFAVRT NVGYNPSPGD EVPVQGVAIT FEPKDFLHIK EKYNNDWWIG
110 120 130 140 150
RLVKEGCEVG FIPSPVKLDS LRLLQEQTLR QNRLSSSKSG DNSSSSLGDV
160 170 180 190 200
VTGTRRPTPP ASGNEMTNFA FELDPLELEE EEAELGEHGG SAKTSVSSVT
210 220 230 240 250
TPPPHGKRIP FFKKTEHVPP YDVVPSMRPI ILVGPSLKGY EVTDMMQKAL
260 270 280 290 300
FDFLKHRFDG RISITRVTAD ISLAKRSVLN NPSKHIIIER SNTRSSLAEV
310 320 330 340 350
QSEIERIFEL ARTLQLVALD ADTINHPAQL SKTSLAPIIV YIKITSPKVL
360 370 380 390 400
QRLIKSRGKS QSKHLNVQIA ASEKLAQCPP EMFDIILDEN QLEDACEHLA
410 420 430 440 450
EYLEAYWKAT HPPSSTPPNP LLNRTMATAA LAASPAPVSN LQVQVLTSLR
460 470
RNLSFWGGLE ASPRGGDAVA QPQEHAM
Length:477
Mass (Da):52,577
Last modified:February 20, 2007 - v1
Checksum:i522D49A8F926DB7F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL591209 Genomic DNA. No translation available.
RefSeqiNP_001152792.1. NM_001159320.2.
UniGeneiMm.41252.

Genome annotation databases

EnsembliENSMUST00000107561; ENSMUSP00000103186; ENSMUSG00000020882.
GeneIDi12295.
UCSCiuc007lfg.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL591209 Genomic DNA. No translation available.
RefSeqiNP_001152792.1. NM_001159320.2.
UniGeneiMm.41252.

3D structure databases

ProteinModelPortaliA2A542.
SMRiA2A542. Positions 11-127, 205-415.
ModBaseiSearch...
MobiDBiSearch...

PTM databases

iPTMnetiA2A542.

Proteomic databases

PeptideAtlasiA2A542.
PRIDEiA2A542.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000107561; ENSMUSP00000103186; ENSMUSG00000020882.
GeneIDi12295.
UCSCiuc007lfg.1. mouse.

Organism-specific databases

CTDi782.
MGIiMGI:102522. Cacnb1.

Phylogenomic databases

GeneTreeiENSGT00390000002740.
HOGENOMiHOG000230979.
HOVERGENiHBG050765.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiA2A542.
ExpressionAtlasiA2A542. baseline and differential.
GenevisibleiA2A542. MM.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR008145. GK/Ca_channel_bsu.
IPR027417. P-loop_NTPase.
IPR001452. SH3_domain.
IPR005443. VDCC_L_b1su.
IPR000584. VDCC_L_bsu.
[Graphical view]
PANTHERiPTHR11824. PTHR11824. 2 hits.
PfamiPF00625. Guanylate_kin. 1 hit.
PF12052. VGCC_beta4Aa_N. 1 hit.
[Graphical view]
PRINTSiPR01626. LCACHANNELB.
PR01627. LCACHANNELB1.
SMARTiSM00072. GuKc. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 2 hits.
SSF52540. SSF52540. 1 hit.
PROSITEiPS50002. SH3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiA2A542_MOUSE
AccessioniPrimary (citable) accession number: A2A542
Entry historyi
Integrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: July 6, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.