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Protein
Submitted name:

Plexin domain-containing protein 1

Gene

Plxdc1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Plexin domain-containing protein 1Imported
Gene namesi
Name:Plxdc1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:1919574. Plxdc1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 19Sequence analysisAdd BLAST19
ChainiPRO_500264262120 – 111Sequence analysisAdd BLAST92

Proteomic databases

PaxDbiA2A539.
PeptideAtlasiA2A539.

Expressioni

Gene expression databases

BgeeiENSMUSG00000017417.
ExpressionAtlasiA2A539. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000103191.

Family & Domainsi

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG3848. Eukaryota.
ENOG410Y7ZQ. LUCA.
GeneTreeiENSGT00440000033408.

Family and domain databases

InterProiView protein in InterPro
IPR031152. PLXDC.
IPR031153. PLXDC1.
PANTHERiPTHR13055. PTHR13055. 1 hit.
PTHR13055:SF13. PTHR13055:SF13. 1 hit.

Sequencei

Sequence statusi: Complete.

A2A539-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRAQLWLLQL LLLRGAARAL SPATPAGHNE GQDSAWTAKR TRQGWSRRPR
60 70 80 90 100
ESPAQVLKPG KTQLSQDLGG GSLAIDTLPD NRTRVVVSAE PTWRERRAGA
110
CLRVRYGEWD G
Length:111
Mass (Da):12,299
Last modified:February 20, 2007 - v1
Checksum:i3D13FDD635D86CFE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL591209 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000107564; ENSMUSP00000103190; ENSMUSG00000017417.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL591209 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000103191.

Proteomic databases

PaxDbiA2A539.
PeptideAtlasiA2A539.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000107564; ENSMUSP00000103190; ENSMUSG00000017417.

Organism-specific databases

MGIiMGI:1919574. Plxdc1.

Phylogenomic databases

eggNOGiKOG3848. Eukaryota.
ENOG410Y7ZQ. LUCA.
GeneTreeiENSGT00440000033408.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000017417.
ExpressionAtlasiA2A539. baseline and differential.

Family and domain databases

InterProiView protein in InterPro
IPR031152. PLXDC.
IPR031153. PLXDC1.
PANTHERiPTHR13055. PTHR13055. 1 hit.
PTHR13055:SF13. PTHR13055:SF13. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA2A539_MOUSE
AccessioniPrimary (citable) accession number: A2A539
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: May 10, 2017
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.