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A2A468 (A2A468_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length1402 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 basic helix-loop-helix (bHLH) domain. RuleBase RU000367

Contains bHLH (basic helix-loop-helix) domain. SAAS SAAS000014

Sequences

Sequence LengthMass (Da)Tools
A2A468 [UniParc].

Last modified February 20, 2007. Version 1.
Checksum: 1018880641B43381

FASTA1,402151,824
        10         20         30         40         50         60 
MSGLGESSLD PLAAESRKRK LPCDAPGQGL VYSGEKWRRE QESKYIEELA ELISANLSDI 

        70         80         90        100        110        120 
DNFNVKPDKC AILKETVRQI RQIKEQGKTI SSDDDVQKAD VSSTGQGVID KDSLGPLLLQ 

       130        140        150        160        170        180 
ALDGFLFVVN RDGNIVFVSE NVTQYLQYKQ EDLVNTSVYS ILHEQDRKDF LKHLPKSTVN 

       190        200        210        220        230        240 
GVSWTNENQR QKSHTFNCRM LMKTHDILED VNASPETRQR YETMQCFALS QPRAMLEEGE 

       250        260        270        280        290        300 
DLQCCMICVA RRVTAPFPSS PESFITRHDL SGKVVNIDTN SLRSSMRPGF EDIIRRCIQR 

       310        320        330        340        350        360 
FFSLNDGQSW SQKRHYQEAY VHGHAETPVY RFSLADGTIV SAQTKSKLFR NPVTNDRHGF 

       370        380        390        400        410        420 
ISTHFLQREQ NGYRPNPNPA GQGIRPPAAG CGVSMSPNQN VQMMGSRTYG VPDPSNTGQM 

       430        440        450        460        470        480 
GGARYGASSS VASLTPGQSL QSPSSYQNSS YGLSMSSPPH GSPGLGPNQQ NIMISPRNRG 

       490        500        510        520        530        540 
SPKMASHQFS PAAGAHSPMG PSGNTGSHSF SSSSLSALQA ISEGVGTSLL STLSSPGPKL 

       550        560        570        580        590        600 
DNSPNMNISQ PSKVSGQDSK SPLGLYCEQN PVESSVCQSN SRDHPSEKES KESSGEVSET 

       610        620        630        640        650        660 
PRGPLESKGH KKLLQLLTCS SDDRGHSSLT NSPLDPNCKD SSVSVTSPSG VSSSTSGTVS 

       670        680        690        700        710        720 
STSNVHGSLL QEKHRILHKL LQNGNSPAEV AKITAEATGK DTSSTASCGE GTTRQEQLSP 

       730        740        750        760        770        780 
KKKENNALLR YLLDRDDPSD VLAKELQPQA DSGDSKLSQC SCSTNPSSGQ EKDPKIKTET 

       790        800        810        820        830        840 
NEEVSGDLDN LDAILGDLTS SDFYNNPTNG GHPGAKQQMF AGPSSLGLRS PQPVQSVRPP 

       850        860        870        880        890        900 
YNRAVSLDSP VSVGSGPPVK NVSAFPGLPK QPILAGNPRM MDSQENYGAN MGPNRNVPVN 

       910        920        930        940        950        960 
PTSSPGDWGL ANSRASRMEP LASSPLGRTG ADYSATLPRP AMGGSVPTLP LRSNRLPGAR 

       970        980        990       1000       1010       1020 
PSLQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ QMLQMRTGEI PMGMGVNPYS PAVPSNQPGS 

      1030       1040       1050       1060       1070       1080 
WPEGMLSMEQ GPHGSQNRPL LRNSLDDLLG PPSNAEGQSD ERALLDQLHT LLSNTDATGL 

      1090       1100       1110       1120       1130       1140 
EEIDRALGIP ELVNQGQALE SKQDVFQGQE AAVMMDQKAA LYGQTYPAQG PPLQGGFNLQ 

      1150       1160       1170       1180       1190       1200 
GQSPSFNSMM GQISQQGSFP LQGMHPRAGL VRPRTNTPKQ LRMQLQQRLQ GQQFLNQSRQ 

      1210       1220       1230       1240       1250       1260 
ALEMKMENPA GTAVMRPMMP QAFFNAQMAA QQKRELMSHH LQQQRMAMMM SQPQPQAFSP 

      1270       1280       1290       1300       1310       1320 
PPNVTASPSM DGVLAGSAMP QAPPQQFPYP ANYGMGQPPE PAFGRGSSPP SAMMSSRMGP 

      1330       1340       1350       1360       1370       1380 
SQNAMVQHPQ PTPMYQPSDM KGWPSGNLAR NGSFPQQQFA PQGNPAAYNM VHMNSSGGHL 

      1390       1400 
GQMAMTPMPM SGMPMGPDQK YC 

« Hide

References

« Hide 'large scale' references
[1]"A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome."
Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W. expand/collapse author list , Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.
Science 296:1661-1671(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Mixed EMBL EDL06475.1.
[2]Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Mixed EMBL EDL06475.1.
[3]"Lineage-specific biology revealed by a finished genome assembly of the mouse."
Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. expand/collapse author list , Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P.
PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C57BL/6J Ensembl ENSMUSP00000104875.
[4]Ensembl
Submitted (JUN-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: C57BL/6J Ensembl ENSMUSP00000104875.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL589873 Genomic DNA. No translation available.
AL589902 Genomic DNA. No translation available.
CH466551 Genomic DNA. Translation: EDL06475.1.
RefSeqXP_006498951.1. XM_006498888.1.
UniGeneMm.469663.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000109252; ENSMUSP00000104875; ENSMUSG00000027678.
GeneID17979.

Organism-specific databases

MGIMGI:1276535. Ncoa3.

Phylogenomic databases

GeneTreeENSGT00530000063109.
HOGENOMHOG000230947.
HOVERGENHBG052583.
OrthoDBEOG72JWFB.

Family and domain databases

Gene3D2.60.120.10. 1 hit.
4.10.630.10. 2 hits.
InterProIPR011598. bHLH_dom.
IPR010011. DUF1518.
IPR028818. NCOA3.
IPR009110. Nuc_rcpt_coact.
IPR014920. Nuc_rcpt_coact_Ncoa-typ.
IPR017426. Nuclear_rcpt_coactivator.
IPR000014. PAS.
IPR013767. PAS_fold.
IPR014710. RmlC-like_jellyroll.
IPR014935. SRC-1.
IPR008955. Src1_rcpt_coact.
[Graphical view]
PANTHERPTHR10684. PTHR10684. 1 hit.
PTHR10684:SF3. PTHR10684:SF3. 1 hit.
PfamPF07469. DUF1518. 1 hit.
PF08815. Nuc_rec_co-act. 1 hit.
PF00989. PAS. 1 hit.
PF08832. SRC-1. 1 hit.
[Graphical view]
PIRSFPIRSF038181. Nuclear_receptor_coactivator. 1 hit.
SMARTSM00353. HLH. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMSSF47459. SSF47459. 1 hit.
SSF55785. SSF55785. 2 hits.
SSF69125. SSF69125. 1 hit.
PROSITEPS50888. BHLH. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSNCOA3. mouse.
NextBio35542501.
SOURCESearch...

Entry information

Entry nameA2A468_MOUSE
AccessionPrimary (citable) accession number: A2A468
Entry history
Integrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: April 16, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)