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Protein
Submitted name:

RNA-binding protein 34

Gene

RBM34

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
RNA-binding protein 34Imported
Gene namesi
Name:RBM34Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 1

Organism-specific databases

EuPathDBiHostDB:ENSG00000188739.14.
HGNCiHGNC:28965. RBM34.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000188739.

PTM / Processingi

Proteomic databases

MaxQBiA2A2V2.
PaxDbiA2A2V2.
PeptideAtlasiA2A2V2.
PRIDEiA2A2V2.

Expressioni

Gene expression databases

BgeeiENSG00000188739.
ExpressionAtlasiA2A2V2. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliA2A2V2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini183 – 258RRMInterPro annotationAdd BLAST76
Domaini265 – 342RRMInterPro annotationAdd BLAST78

Phylogenomic databases

eggNOGiKOG0118. Eukaryota.
COG0724. LUCA.
GeneTreeiENSGT00390000011249.
HOGENOMiHOG000060230.
HOVERGENiHBG052167.

Family and domain databases

CDDicd12395. RRM2_RBM34. 1 hit.
InterProiView protein in InterPro
IPR035979. RBD_domain_sf.
IPR034221. RBM34_RRM2.
IPR000504. RRM_dom.
PfamiView protein in Pfam
PF00076. RRM_1. 1 hit.
SMARTiView protein in SMART
SM00360. RRM. 2 hits.
SUPFAMiSSF54928. SSF54928. 2 hits.
PROSITEiView protein in PROSITE
PS50102. RRM. 2 hits.

Sequencei

Sequence statusi: Fragment.

A2A2V2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
LEGMSKRKRK RSVQEGENPD DGVRGSPPED YRLGQVASSL FRGEHHSRGG
60 70 80 90 100
TGRLASLFSS LEPQIQPVYV PVPKQTIKKT KRNEEEESTS QIERPLSQEP
110 120 130 140 150
AKKVKAKKKH TNAEKKLADR ESALASADLE EEIHQKQGQK RKNSQPGVKV
160 170 180 190 200
ADRKILDDTE DTVVSQRKKI QINQEEERLK NERTVFVGNL PVTCNKKIPA
210 220 230 240 250
EGTLSKKLAA IKRKIHPDQK NINAYVVFKE ESAATQALKR NGAQIADGFR
260 270 280 290 300
IRVDLASETS SRDKRSVFVG NLPYKVEESA IEKHFLDCGS IMAVRIVRDK
310 320 330 340 350
MTGIGKGFGY VLFENTDSVH LALKLNNSEL MGRKLRVMRS VNKEKFKQQN
360 370 380 390 400
SNPRLKNVSK PKQGLNFTSK TAEGHPKSLF IGEKAVLLKT KKKGQKKSGR

PKKQRKQK
Length:408
Mass (Da):45,918
Last modified:February 20, 2007 - v1
Checksum:iEB5746244A814CBF
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL133418 Genomic DNA. No translation available.
AL732292 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000447801; ENSP00000400000; ENSG00000188739.
UCSCiuc057qnb.1. human.

Similar proteinsi

Entry informationi

Entry nameiA2A2V2_HUMAN
AccessioniPrimary (citable) accession number: A2A2V2
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: October 25, 2017
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported