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A2A259 (A2A259_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Polycystic kidney disease 2-like 1 EMBL BAF45380.1
Submitted name:
Protein Pkd2l1 Ensembl ENSMUSP00000045675
Gene names
Name:Pkd2l1 Ensembl ENSMUSP00000045675 MGI 1352448
Synonyms:PKD2L1 EMBL BAF45380.1
OrganismMus musculus (Mouse) [Reference proteome]
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length760 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
A2A259 [UniParc].

Last modified February 20, 2007. Version 1.
Checksum: 4C76777051CFC2EF

FASTA76087,234
        10         20         30         40         50         60 
MNSMESPKNQ ELQTLGNRAW DNPAYSDPPS PNRTLRICTV SSVALPETQP KKPEVRCQEK 

        70         80         90        100        110        120 
TQRTLVSSCC LHICRSIRGL WGTTLTENTA ENRELYVKTT LRELVVYIVF LVDICLLTYG 

       130        140        150        160        170        180 
MTSSSAYYYT KVMSELFLHT PSDSGVSFQT ISSMSDFWDF AQGPLLDSLY WTKWYNNQSL 

       190        200        210        220        230        240 
GRGSHSFIYY ENLLLGAPRL RQLRVRNDSC VVHEDFREDI LNCYDVYSPD KEDQLPFGPQ 

       250        260        270        280        290        300 
NGTAWTYHSQ NELGGSSHWG RLTSYSGGGY YLDLPGSRQA SAEALQGLQE GLWLDRGTRV 

       310        320        330        340        350        360 
VFIDFSVYNA NINLFCILRL VVEFPATGGT IPSWQIRTVK LIRYVNNWDF FIVGCEVVFC 

       370        380        390        400        410        420 
VFIFYYVVEE ILEIHLHRLR YLSSVWNILD LVVILLSIVA VGFHIFRTLE VNRLMGKLLQ 

       430        440        450        460        470        480 
QPDTYADFEF LAFWQTQYNN MNAVNLFFAW IKIFKYISFN KTMTQLSSTL ARCAKDILGF 

       490        500        510        520        530        540 
AIMFFIVFFA YAQLGYLLFG TQVENFSTFV KCIFTQFRII LGDFDYNAID NANRILGPVY 

       550        560        570        580        590        600 
FVTYVFFVFF VLLNMFLAII NDTYSEVKEE LAGQKDQLQL SDFLKQSYNK TLLRLRLRKE 

       610        620        630        640        650        660 
RVSDVQKVLK GGEPEIQFED FTSTLRELGH EEHEITAAFT RFDQDGDHIL DEEEQEQMRQ 

       670        680        690        700        710        720 
GLEEERVTLN AEIENLGRSV GHSPPGELGA EAARGQSWVS GEEFDMLTRR VLQLQCVLEG 

       730        740        750        760 
VVSQIDAVGS KLKMLERKGE LAPSPGMGEP AVWENLYNPS

« Hide

References

« Hide 'large scale' references
[1]"Transient receptor potential family members PKD1L3 and PKD2L1 form a candidate sour taste receptor."
Ishimaru Y., Inada H., Kubota M., Zhuang H., Tominaga M., Matsunami H.
Proc. Natl. Acad. Sci. U.S.A. 103:12569-12574(2006)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6 EMBL BAF45380.1.
[2]Ishimaru Y.
Submitted (JAN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6 EMBL BAF45380.1.
[3]"Lineage-specific biology revealed by a finished genome assembly of the mouse."
Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. expand/collapse author list , Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P.
PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C57BL/6J Ensembl ENSMUSP00000045675.
[4]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: C57BL/6J Ensembl ENSMUSP00000045675.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AC125101 Genomic DNA. No translation available.
AB290927 mRNA. Translation: BAF45380.1.
IPIIPI00776115.
RefSeqNP_852087.2. NM_181422.3.
UniGeneMm.308481.

3D structure databases

SMRA2A259. Positions 597-672, 698-739.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000042026; ENSMUSP00000045675; ENSMUSG00000037578.
GeneID329064.
KEGGmmu:329064.
UCSCuc008hpm.2. mouse.

Organism-specific databases

CTD9033.
MGIMGI:1352448. Pkd2l1.

Phylogenomic databases

eggNOGNOG325704.
GeneTreeENSGT00700000104221.
HOGENOMHOG000230858.
HOVERGENHBG014945.
InParanoidA2A259.
KOK04990.
OMAGFHIFRT.
OrthoDBEOG4D52X2.

Gene expression databases

GenevestigatorA2A259.

Family and domain databases

Gene3D1.10.238.10. 1 hit.
InterProIPR011992. EF-hand-like_dom.
IPR002048. EF_hand_dom.
IPR013122. PKD1_2_channel.
IPR003915. PKD_2.
[Graphical view]
PfamPF08016. PKD_channel. 1 hit.
[Graphical view]
PRINTSPR01433. POLYCYSTIN2.
PROSITEPS50222. EF_HAND_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio398558.
SOURCESearch...

Entry information

Entry nameA2A259_MOUSE
AccessionPrimary (citable) accession number: A2A259
Entry history
Integrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: May 1, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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