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Protein

Protein PTCD3 homolog, mitochondrial

Gene

CG4679

Organism
Drosophila melanogaster (Fruit fly)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Mitochondrial protein that may have a role in mitochondrial translation.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding
Biological processTranslation regulation

Enzyme and pathway databases

ReactomeiR-DME-5389840. Mitochondrial translation elongation.
R-DME-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein PTCD3 homolog, mitochondrial
Gene namesi
ORF Names:CG4679
OrganismiDrosophila melanogaster (Fruit fly)
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome 2R

Organism-specific databases

FlyBaseiFBgn0033816. CG4679.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 37MitochondrionSequence analysisAdd BLAST37
ChainiPRO_000030503438 – 652Protein PTCD3 homolog, mitochondrialAdd BLAST615

Proteomic databases

PaxDbiA1Z9A8.
PRIDEiA1Z9A8.

Expressioni

Gene expression databases

BgeeiFBgn0033816.
ExpressionAtlasiA1Z9A8. differential.
GenevisibleiA1Z9A8. DM.

Interactioni

Protein-protein interaction databases

BioGridi62229. 3 interactors.
IntActiA1Z9A8. 1 interactor.
STRINGi7227.FBpp0086872.

Structurei

3D structure databases

ProteinModelPortaliA1Z9A8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG4422. Eukaryota.
ENOG410XNQS. LUCA.
InParanoidiA1Z9A8.
KOiK17659.
OMAiAPHYKYH.
OrthoDBiEOG091G03F0.
PhylomeDBiA1Z9A8.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
InterProiView protein in InterPro
IPR002885. Pentatricopeptide_repeat.
IPR011990. TPR-like_helical_dom.
PfamiView protein in Pfam
PF13812. PPR_3. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A1Z9A8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYLSRQLRLL PRANIACSLS SSGAHYTTAA PAEDAPIEIP NRIERSPTDL
60 70 80 90 100
LQALASTVAR DYTAPHYKYH DDPFLIPMSN AAKRTYAMSK ESGRKAAKWI
110 120 130 140 150
KEEHRELFMH QEAQPAIEKF APSMVYTEDS VVDETSLAQL ISQGELKDAV
160 170 180 190 200
LVYNLLEQKG NPISPELKQS LLELVCFHNN QEPIPEEYIE ERWFLQNNKR
210 220 230 240 250
RERSGKTWKD GDLAEKLYSE IEPKTPQSYA SLIRGMAKYL QCERAYALLQ
260 270 280 290 300
EAGEKQVQLD TNTFNSVIEI VSFLKDTAEQ RWQLCKDLLN EMSQQKLRPN
310 320 330 340 350
LGTLNAVLQC ISTFGNFKVA RAAALQALPE FKQLGVNPSL GSYYYLLIIF
360 370 380 390 400
CRERGPVSHV IVDILNDISG KEFQIQHPKD TYFFATAMDV CRNHLHDKSL
410 420 430 440 450
AKKVDELLHT GKNYDLVGDS FKESIYYRNY LALLCQTEST EDFMLSYDLL
460 470 480 490 500
VPNIYIPEPG IMEEILRAIE INGAVEYVPR LWSDMVVFDH THRESLLLYV
510 520 530 540 550
LRILVDNKPN PDSPAQAQLP EQGAKVALDM FERVEEAIKR LRKVSFTGQM
560 570 580 590 600
LGDILTLLVR GGSYEKATEV FAHIDKNQHR IPGTPSLNAL IEFVDASVQE
610 620 630 640 650
KSPSQALFAL QYAVENNFDS RELAKRIHEG FTLNETHLSK LKSLVGESFL

DK
Length:652
Mass (Da):74,207
Last modified:February 6, 2007 - v1
Checksum:iE0964202B85D1987
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti98K → R in AAM51998 (PubMed:12537569).Curated1
Sequence conflicti412K → E in AAM51998 (PubMed:12537569).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE013599 Genomic DNA. Translation: AAF58398.1.
AY121671 mRNA. Translation: AAM51998.1.
RefSeqiNP_610854.1. NM_137010.3.
UniGeneiDm.13547.

Genome annotation databases

EnsemblMetazoaiFBtr0087759; FBpp0086872; FBgn0033816.
GeneIDi36466.
KEGGidme:Dmel_CG4679.
UCSCiCG4679-RA. d. melanogaster.

Similar proteinsi

Entry informationi

Entry nameiPTCD3_DROME
AccessioniPrimary (citable) accession number: A1Z9A8
Secondary accession number(s): Q8MRC2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 2, 2007
Last sequence update: February 6, 2007
Last modified: September 27, 2017
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programDrosophila annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Drosophila
    Drosophila: entries, gene names and cross-references to FlyBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families