A1Z7C4 (A1Z7C4_DROME) Unreviewed, UniProtKB/TrEMBL
Last modified
January 25, 2012.
Version 61.
History...
Names and origin
| Protein names | Submitted name: CG33087 EMBL AAF59114.3 | ||||
| Gene names |
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| Organism | Drosophila melanogaster (Fruit fly) | ||||
| Taxonomic identifier | 7227 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora |
Protein attributes
| Sequence length | 4699 AA. |
| Sequence status | Complete. |
| Protein existence | Predicted |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Membrane |
| Domain | EGF-like domain RuleBase RU000458 SAAS SAAS018097 Repeat SAAS SAAS011042 Transmembrane Transmembrane helix SAAS SAAS000033 |
| PTM | Disulfide bond SAAS SAAS023415 |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Cellular component | integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | calcium ion binding Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. Venter J.C.Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley. |
| [2] | "Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. Lewis S.E.Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Berkeley. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AE013599 Genomic DNA. Translation: AAF59114.3. |
| RefSeq | NP_788284.1. NM_176104.1. |
| UniGene | Dm.19876. |
3D structure databases | |
| ProteinModelPortal | A1Z7C4. |
| SMR | A1Z7C4. Positions 35-158, 166-239, 245-578, 890-915, 935-1630, 1663-1933, 1940-2571, 2576-2652, 2755-3403, 3567-4565. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | A1Z7C4. 1 interaction. |
| STRING | A1Z7C4. |
Proteomic databases | |
| PRIDE | A1Z7C4. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblMetazoa | FBtr0088791; FBpp0087868; FBgn0053087. |
| GeneID | 35799. |
| KEGG | dme:Dmel_CG33087. |
| NMPDR | fig|7227.3.peg.3843. |
| UCSC | CG33087-RC. d. melanogaster. |
Organism-specific databases | |
| CTD | 4035. |
| FlyBase | FBgn0053087. LRP1. |
Phylogenomic databases | |
| eggNOG | inNOG07413. |
| GeneTree | EMGT00050000000208. |
| InParanoid | A1Z7C4. |
| OMA | DEEACGT. |
| OrthoDB | EOG46DJHJ. |
| PhylomeDB | A1Z7C4. |
Gene expression databases | |
| Bgee | A1Z7C4. |
Family and domain databases | |
| InterPro | IPR011042. 6-blade_b-propeller_TolB-like. IPR006209. EGF. IPR006210. EGF-like. IPR001881. EGF-like_Ca-bd. IPR013032. EGF-like_reg_CS. IPR000152. EGF-type_Asp/Asn_hydroxyl_site. IPR000742. EGF_3. IPR018097. EGF_Ca-bd_CS. IPR003645. Fol_N. IPR009030. Growth_fac_rcpt. IPR023415. LDLR_class-A_CS. IPR000033. LDLR_classB_rpt. IPR002172. LDrepeatLR_classA_rpt. [Graphical view] |
| Gene3D | G3DSA:2.120.10.30. 6-blade_b-propeller_TolB-like. 8 hits. G3DSA:4.10.400.10. LDL_rcpt_classA_cys-rich. 29 hits. |
| KO | K04550. |
| Pfam | PF00008. EGF. 1 hit. PF07645. EGF_CA. 2 hits. PF00057. Ldl_recept_a. 23 hits. PF00058. Ldl_recept_b. 6 hits. [Graphical view] |
| SMART | SM00181. EGF. 19 hits. SM00179. EGF_CA. 3 hits. SM00274. FOLN. 4 hits. SM00192. LDLa. 31 hits. SM00135. LY. 32 hits. [Graphical view] |
| SUPFAM | SSF57184. Grow_fac_recept. 3 hits. SSF57424. LDL_rcpt_classA_cys-rich. 26 hits. |
| PROSITE | PS00010. ASX_HYDROXYL. 4 hits. PS00022. EGF_1. 8 hits. PS01186. EGF_2. 9 hits. PS50026. EGF_3. 11 hits. PS01187. EGF_CA. 3 hits. PS01209. LDLRA_1. 22 hits. PS50068. LDLRA_2. 31 hits. PS51120. LDLRB. 33 hits. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 795266. |
Entry information
| Entry name | A1Z7C4_DROME | ||||||||
| Accession | Primary (citable) accession number: A1Z7C4 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
