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Protein
Submitted name:

Troy-long

Gene

TNFRSF19

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Troy-longImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:TNFRSF19Imported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus
Proteomesi
  • UP000000539 Componenti: Chromosome 1

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei168 – 19225HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2828Sequence analysisAdd
BLAST
Chaini29 – 409381Sequence analysisPRO_5007633584Add
BLAST

Expressioni

Gene expression databases

BgeeiENSGALG00000017119.

Interactioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000027605.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini32 – 7140TNFR-CysInterPro annotationAdd
BLAST
Domaini73 – 11341TNFR-CysInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IFRK. Eukaryota.
ENOG410ZU96. LUCA.
GeneTreeiENSGT00730000110978.
HOGENOMiHOG000049070.
HOVERGENiHBG069143.
KOiK05155.
OMAiICGEFSD.
OrthoDBiEOG091G0ADI.
PhylomeDBiA1XGV6.
TreeFamiTF331385.

Family and domain databases

InterProiIPR001368. TNFR/NGFR_Cys_rich_reg.
IPR022342. TNFR_19.
[Graphical view]
PfamiPF00020. TNFR_c6. 2 hits.
[Graphical view]
PRINTSiPR01969. TNFACTORR19.
SMARTiSM00208. TNFR. 2 hits.
[Graphical view]
PROSITEiPS00652. TNFR_NGFR_1. 2 hits.
PS50050. TNFR_NGFR_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1XGV6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDPKGLQGED KLKMLIILLA YLLSRVICET GDCREQEFRD HAGNCILCKQ
60 70 80 90 100
CGPGMELSKE CGFGYGEDAQ CMTCRPNRFK EDWGFQKCKP CLDCALVNRF
110 120 130 140 150
QKANCSATSN ALCGDCLPGF YRKTKLGGFQ DMECVPCGDP PPPYEPHCTT
160 170 180 190 200
KVNLVKIPST ASSPRDTALA AVICSALATV LLALLILCVI YCKRQFMEKK
210 220 230 240 250
PSWSLRSQDI HYSGSELSCF DRPRLNEYDH RTCCQCQRST SQTCGPVHLI
260 270 280 290 300
PSLCCDETCS MEHSSHSCAL QSQTTLNERT SDSVGEMIPA FLGSLSHSAC
310 320 330 340 350
GDISDAWPLM QNSACCDSIS FCESYSELAG VAAKSCSLET ENETAIESDN
360 370 380 390 400
NQELSDVLTS AKSPDGNIAK SFEISKHRTY IEVSSLQNSA AAESQPNTKC

NGTADDSTD
Length:409
Mass (Da):44,665
Last modified:February 6, 2007 - v1
Checksum:iB5D50327F38FEE40
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN03001290 Genomic DNA. No translation available.
DQ360499 mRNA. Translation: ABC87287.1.
RefSeqiNP_001073572.1. NM_001080103.1.
XP_015133516.1. XM_015278030.1.
XP_015133526.1. XM_015278040.1.
UniGeneiGga.10477.
Gga.14768.

Genome annotation databases

EnsembliENSGALT00000027657; ENSGALP00000027605; ENSGALG00000017119.
GeneIDi418943.
KEGGigga:418943.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN03001290 Genomic DNA. No translation available.
DQ360499 mRNA. Translation: ABC87287.1.
RefSeqiNP_001073572.1. NM_001080103.1.
XP_015133516.1. XM_015278030.1.
XP_015133526.1. XM_015278040.1.
UniGeneiGga.10477.
Gga.14768.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9031.ENSGALP00000027605.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSGALT00000027657; ENSGALP00000027605; ENSGALG00000017119.
GeneIDi418943.
KEGGigga:418943.

Organism-specific databases

CTDi55504.

Phylogenomic databases

eggNOGiENOG410IFRK. Eukaryota.
ENOG410ZU96. LUCA.
GeneTreeiENSGT00730000110978.
HOGENOMiHOG000049070.
HOVERGENiHBG069143.
KOiK05155.
OMAiICGEFSD.
OrthoDBiEOG091G0ADI.
PhylomeDBiA1XGV6.
TreeFamiTF331385.

Gene expression databases

BgeeiENSGALG00000017119.

Family and domain databases

InterProiIPR001368. TNFR/NGFR_Cys_rich_reg.
IPR022342. TNFR_19.
[Graphical view]
PfamiPF00020. TNFR_c6. 2 hits.
[Graphical view]
PRINTSiPR01969. TNFACTORR19.
SMARTiSM00208. TNFR. 2 hits.
[Graphical view]
PROSITEiPS00652. TNFR_NGFR_1. 2 hits.
PS50050. TNFR_NGFR_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA1XGV6_CHICK
AccessioniPrimary (citable) accession number: A1XGV6
Secondary accession number(s): F1P173
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: September 7, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.