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Protein
Submitted name:

Troy-long

Gene

TNFRSF19

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Troy-longImported
Gene namesi
Name:TNFRSF19Imported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus
Proteomesi
  • UP000000539 Componenti: Chromosome 1

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei168 – 192HelicalSequence analysisAdd BLAST25

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 28Sequence analysisAdd BLAST28
ChainiPRO_500968229129 – 409Sequence analysisAdd BLAST381

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi48 ↔ 61PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bondPROSITE-ProRule annotation

Expressioni

Gene expression databases

BgeeiENSGALG00000017119.

Interactioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000027605.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini32 – 71TNFR-CysInterPro annotationAdd BLAST40
Repeati32 – 71TNFR-CysPROSITE-ProRule annotationAdd BLAST40
Domaini73 – 113TNFR-CysInterPro annotationAdd BLAST41
Repeati73 – 113TNFR-CysPROSITE-ProRule annotationAdd BLAST41

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IFRK. Eukaryota.
ENOG410ZU96. LUCA.
GeneTreeiENSGT00730000110978.
HOGENOMiHOG000049070.
HOVERGENiHBG069143.
KOiK05155.
OMAiICGEFSD.
OrthoDBiEOG091G0ADI.
TreeFamiTF331385.

Family and domain databases

CDDicd13418. TNFRSF19. 1 hit.
InterProiView protein in InterPro
IPR001368. TNFR/NGFR_Cys_rich_reg.
IPR022342. TNFR_19.
IPR034047. TNFRSF19_N.
PANTHERiPTHR12120:SF14. PTHR12120:SF14. 1 hit.
PfamiView protein in Pfam
PF00020. TNFR_c6. 2 hits.
PRINTSiPR01969. TNFACTORR19.
SMARTiView protein in SMART
SM00208. TNFR. 2 hits.
PROSITEiView protein in PROSITE
PS00652. TNFR_NGFR_1. 2 hits.
PS50050. TNFR_NGFR_2. 2 hits.

Sequencei

Sequence statusi: Complete.

A1XGV6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDPKGLQGED KLKMLIILLA YLLSRVICET GDCREQEFRD HAGNCILCKQ
60 70 80 90 100
CGPGMELSKE CGFGYGEDAQ CMTCRPNRFK EDWGFQKCKP CLDCALVNRF
110 120 130 140 150
QKANCSATSN ALCGDCLPGF YRKTKLGGFQ DMECVPCGDP PPPYEPHCTT
160 170 180 190 200
KVNLVKIPST ASSPRDTALA AVICSALATV LLALLILCVI YCKRQFMEKK
210 220 230 240 250
PSWSLRSQDI HYSGSELSCF DRPRLNEYDH RTCCQCQRST SQTCGPVHLI
260 270 280 290 300
PSLCCDETCS MEHSSHSCAL QSQTTLNERT SDSVGEMIPA FLGSLSHSAC
310 320 330 340 350
GDISDAWPLM QNSACCDSIS FCESYSELAG VAAKSCSLET ENETAIESDN
360 370 380 390 400
NQELSDVLTS AKSPDGNIAK SFEISKHRTY IEVSSLQNSA AAESQPNTKC

NGTADDSTD
Length:409
Mass (Da):44,665
Last modified:February 6, 2007 - v1
Checksum:iB5D50327F38FEE40
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN04000263 Genomic DNA. No translation available.
DQ360499 mRNA. Translation: ABC87287.1.
RefSeqiNP_001073572.1. NM_001080103.1.
XP_015133516.1. XM_015278030.1.
XP_015133526.1. XM_015278040.1.
UniGeneiGga.10477.
Gga.14768.

Genome annotation databases

EnsembliENSGALT00000027657; ENSGALP00000027605; ENSGALG00000017119.
GeneIDi418943.
KEGGigga:418943.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN04000263 Genomic DNA. No translation available.
DQ360499 mRNA. Translation: ABC87287.1.
RefSeqiNP_001073572.1. NM_001080103.1.
XP_015133516.1. XM_015278030.1.
XP_015133526.1. XM_015278040.1.
UniGeneiGga.10477.
Gga.14768.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9031.ENSGALP00000027605.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSGALT00000027657; ENSGALP00000027605; ENSGALG00000017119.
GeneIDi418943.
KEGGigga:418943.

Organism-specific databases

CTDi55504.

Phylogenomic databases

eggNOGiENOG410IFRK. Eukaryota.
ENOG410ZU96. LUCA.
GeneTreeiENSGT00730000110978.
HOGENOMiHOG000049070.
HOVERGENiHBG069143.
KOiK05155.
OMAiICGEFSD.
OrthoDBiEOG091G0ADI.
TreeFamiTF331385.

Gene expression databases

BgeeiENSGALG00000017119.

Family and domain databases

CDDicd13418. TNFRSF19. 1 hit.
InterProiView protein in InterPro
IPR001368. TNFR/NGFR_Cys_rich_reg.
IPR022342. TNFR_19.
IPR034047. TNFRSF19_N.
PANTHERiPTHR12120:SF14. PTHR12120:SF14. 1 hit.
PfamiView protein in Pfam
PF00020. TNFR_c6. 2 hits.
PRINTSiPR01969. TNFACTORR19.
SMARTiView protein in SMART
SM00208. TNFR. 2 hits.
PROSITEiView protein in PROSITE
PS00652. TNFR_NGFR_1. 2 hits.
PS50050. TNFR_NGFR_2. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiA1XGV6_CHICK
AccessioniPrimary (citable) accession number: A1XGV6
Secondary accession number(s): F1P173
Entry historyiIntegrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: March 15, 2017
This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.