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A1WYU9 (A1WYU9_HALHL) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length575 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3838 Potential EMBL ABM62861.1
Chain39 – 575537 Potential EMBL ABM62861.1
PRO_5000213551

Sequences

Sequence LengthMass (Da)Tools
A1WYU9 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: AE5B4AC69F3B9678

FASTA57562,263
        10         20         30         40         50         60 
MSRNTRRQPA LNGPPRWRLY SVVAVMAIAA GAVILRALDL QVINSEFLRD EADARHLRTV 

        70         80         90        100        110        120 
SMPAHRGVIT DRNGEPLAIS SPVKSAWANP GELLEDGAAV AAVAEVLERS PAELRDFLKA 

       130        140        150        160        170        180 
REGRHFVYLR RHLSPQVATR MRELDAPGVQ LQQEFRRFYP AGEVAAQLVG FTDIDGQGLA 

       190        200        210        220        230        240 
GVERAFEDPL SGRSGAKRVI RDPFGRTIED VELLREPRPG EDVHLSLDRR IQYVAYRELK 

       250        260        270        280        290        300 
RAVRGHDAEG GAAVVLDATS GEVLAMVSQP SFNPHRRAGV EPEQRRNRAV SWAQEPGSVI 

       310        320        330        340        350        360 
KPFTIAAALS SGAVRSGQAF DTAPGTMRVG RHTVRDFLDY GELDIAGVLQ KSSNVGTVKM 

       370        380        390        400        410        420 
ALETEPRALW NTLEDIGFGE RTRSGLRDEV AGQFLPAPPR GDVQRATLSY GYGVTATPLQ 

       430        440        450        460        470        480 
LARAYAALAR DGVIRPISIQ AVEEPPEGRQ VLDPELAAEI RGMLEAVVEP GGTGTRAAIS 

       490        500        510        520        530        540 
GYRVAGKTGT VLKSGPSGYA EEDYLASFIG FAPASDPRLV MAVTIDQPRG DLYYGGQVAA 

       550        560        570 
PVFSRVMGNA LRMLNVPPDD LPELEVPVVA EREGS

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References

[1]"Complete sequence of Halorhodospira halophila SL1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Mikhailova N., Hoff W., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 244 / SL1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000544 Genomic DNA. Translation: ABM62861.1.
RefSeqYP_001003663.1. NC_008789.1.

3D structure databases

ProteinModelPortalA1WYU9.
ModBaseSearch...

Protein-protein interaction databases

STRING349124.Hhal_2097.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM62861; ABM62861; Hhal_2097.
GeneID4709967.
KEGGhha:Hhal_2097.
PATRIC22098493. VBIHalHal112047_2073.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0768.
HOGENOMHOG000049554.
KOK03587.
OMAILETEHR.
ProtClustDBCLSK727572.

Enzyme and pathway databases

BioCycHHAL349124:GI3I-2147-MONOMER.

Family and domain databases

Gene3D3.40.710.10. 1 hit.
InterProIPR012338. Beta-lactam/transpept-like.
IPR005311. PBP_dimer.
IPR001460. PCN-bd_Tpept.
[Graphical view]
PfamPF03717. PBP_dimer. 1 hit.
PF00905. Transpeptidase. 1 hit.
[Graphical view]
SUPFAMSSF56519. PBP_dimer. 1 hit.
SSF56601. PBP_transp_fold. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1WYU9_HALHL
AccessionPrimary (citable) accession number: A1WYU9
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: May 29, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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