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A1WWA5

- GCSPA_HALHL

UniProt

A1WWA5 - GCSPA_HALHL

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Protein
Probable glycine dehydrogenase (decarboxylating) subunit 1
Gene
gcvPA, Hhal_1192
Organism
Halorhodospira halophila (strain DSM 244 / SL1) (Ectothiorhodospira halophila (strain DSM 244 / SL1))
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO2 is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein By similarity.UniRule annotation

Catalytic activityi

Glycine + [glycine-cleavage complex H protein]-N(6)-lipoyl-L-lysine = [glycine-cleavage complex H protein]-S-aminomethyl-N(6)-dihydrolipoyl-L-lysine + CO2.UniRule annotation

GO - Molecular functioni

  1. glycine dehydrogenase (decarboxylating) activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. glycine catabolic process Source: InterPro
  2. nucleoside metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Enzyme and pathway databases

BioCyciHHAL349124:GI3I-1229-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable glycine dehydrogenase (decarboxylating) subunit 1 (EC:1.4.4.2)
Alternative name(s):
Glycine cleavage system P-protein subunit 1
Glycine decarboxylase subunit 1
Glycine dehydrogenase (aminomethyl-transferring) subunit 1
Gene namesi
Name:gcvPA
Ordered Locus Names:Hhal_1192
OrganismiHalorhodospira halophila (strain DSM 244 / SL1) (Ectothiorhodospira halophila (strain DSM 244 / SL1))
Taxonomic identifieri349124 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesEctothiorhodospiraceaeHalorhodospira
ProteomesiUP000000647: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 460460Probable glycine dehydrogenase (decarboxylating) subunit 1UniRule annotation
PRO_1000045658Add
BLAST

Interactioni

Subunit structurei

The glycine cleavage system is composed of four proteins: P, T, L and H. In this organism, the P 'protein' is a heterodimer of two subunits By similarity.

Protein-protein interaction databases

STRINGi349124.Hhal_1192.

Structurei

3D structure databases

ProteinModelPortaliA1WWA5.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0403.
HOGENOMiHOG000132025.
KOiK00282.
OMAiRLVGQTE.
OrthoDBiEOG6XWV3B.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
HAMAPiMF_00712. GcvPA.
InterProiIPR023010. GcvPA.
IPR020580. GDC-P_N.
IPR020581. GDC_P.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11773. PTHR11773. 1 hit.
PfamiPF02347. GDC-P. 1 hit.
[Graphical view]
PIRSFiPIRSF006815. GcvPA. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

A1WWA5-1 [UniParc]FASTAAdd to Basket

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MPFVPHTEQE VREMLDAIGV ERIEDLFDEI PESLRKASID AIPAGMNEME    50
VTQLMRRRAA QDVQPACFVG AGAYDHHVPA AVWEITTRGE FYSAYTPYQA 100
EASQGTLQLL YEFQTMMSEL TGLYASNASL YDGATALAEA VLMAVRANRK 150
VKSKRVLMPR SVHPYYRRVV ETIVANQGIE LVEAPLDDTV GRIDPEALGR 200
FEDEPFAAVV IPQPNFFGAL EEVDRLTDWA HGLNALVIAV CNPVALALLT 250
PPGEWGTEGA DIACGEGQPL GIPLSSGGPY FGYMTTRKQH VRQLPGRIVG 300
RTVDADGRTG YTLTLQAREQ HIRRSKATSN ICTNQGLMVT AATVHLSLLG 350
AEGLARVAAV SHERTRELVQ KLTAIDGVER LFDGPFFHEV PVRIPAPAEE 400
VLPMLANRGV LGGYDLSQEF PEWGPALLIC ATETRTSEEI DRFAAALADA 450
LRNTGQRARA 460
Length:460
Mass (Da):50,307
Last modified:February 6, 2007 - v1
Checksum:i1C1AEA1151C6B2CA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000544 Genomic DNA. Translation: ABM61967.1.
RefSeqiYP_001002769.1. NC_008789.1.

Genome annotation databases

EnsemblBacteriaiABM61967; ABM61967; Hhal_1192.
GeneIDi4710520.
KEGGihha:Hhal_1192.
PATRICi22096693. VBIHalHal112047_1185.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000544 Genomic DNA. Translation: ABM61967.1 .
RefSeqi YP_001002769.1. NC_008789.1.

3D structure databases

ProteinModelPortali A1WWA5.
ModBasei Search...

Protein-protein interaction databases

STRINGi 349124.Hhal_1192.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABM61967 ; ABM61967 ; Hhal_1192 .
GeneIDi 4710520.
KEGGi hha:Hhal_1192.
PATRICi 22096693. VBIHalHal112047_1185.

Phylogenomic databases

eggNOGi COG0403.
HOGENOMi HOG000132025.
KOi K00282.
OMAi RLVGQTE.
OrthoDBi EOG6XWV3B.

Enzyme and pathway databases

BioCyci HHAL349124:GI3I-1229-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
HAMAPi MF_00712. GcvPA.
InterProi IPR023010. GcvPA.
IPR020580. GDC-P_N.
IPR020581. GDC_P.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
PANTHERi PTHR11773. PTHR11773. 1 hit.
Pfami PF02347. GDC-P. 1 hit.
[Graphical view ]
PIRSFi PIRSF006815. GcvPA. 1 hit.
SUPFAMi SSF53383. SSF53383. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 244 / SL1.

Entry informationi

Entry nameiGCSPA_HALHL
AccessioniPrimary (citable) accession number: A1WWA5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: February 6, 2007
Last modified: September 3, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3
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