A1WJ35 (A1WJ35_VEREI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RNA-binding S4 domain protein EMBL ABM57642.1

Gene names

Ordered Locus Names:

Veis_1889 EMBL ABM57642.1

Organism

Verminephrobacter eiseniae (strain EF01-2) [Complete proteome] [HAMAP] EMBL ABM57642.1

Taxonomic identifier

391735 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Verminephrobacter › Verminephrobacter eiseniae

Protein attributes

Sequence length	264 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pseudouridine synthesis Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro pseudouridine synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1WJ35 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: 25EF323898DF34E3	FASTA	264	28,708
	10 20 30 40 50 60 MTENQPDPGL LRLTRRVARQ LNCSRSTAEQ LIENGCVSVQ GQVVQAPGAR VSAQQNVTVA 70 80 90 100 110 120 QDAALPDPRP VTLLLHKPAG FAASSAAPPD GPQASALLHA ASHLAEDASG MRVLPRHFLH 130 140 150 160 170 180 LACLTPLPTE ASGLVVYTQD RRLARVFAQD FAQDMALRQP AQQTHSPEQE CIVQVAGTIA 190 200 210 220 230 240 PDGLQRLRQG LLLDGLRLPP IRASWQNETR LRFALKGVRP GQIPAICAAV GLTVEAIKRI 250 260 RIGRVALARQ PPGQWRYLLP WERF

References

[1]

"Complete sequence of chromosome 1 of Verminephrobacter eiseniae EF01-2." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Kim E., Stahl D., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: EF01-2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000542 Genomic DNA. Translation: ABM57642.1.
RefSeq	YP_996660.1. NC_008786.1.
3D structure databases
ProteinModelPortal	A1WJ35.
ModBase	Search...
Protein-protein interaction databases
STRING	391735.Veis_1889.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABM57642; ABM57642; Veis_1889.
GeneID	4693023.
KEGG	vei:Veis_1889.
PATRIC	24017399. VBIVerEis120356_2092.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1187.
HOGENOM	HOG000044956.
KO	K06182.
OMA	GGWVTVD.
ProtClustDB	CLSK732241.
Enzyme and pathway databases
BioCyc	VEIS391735:GHY5-1909-MONOMER.
Family and domain databases
Gene3D	3.10.290.10. 1 hit.
InterPro	IPR020103. PsdUridine_synth_cat_dom. IPR002942. S4_RNA-bd. [Graphical view]
Pfam	PF01479. S4. 1 hit. [Graphical view]
SMART	SM00363. S4. 1 hit. [Graphical view]
SUPFAM	SSF55120. PsdUridine_synth_cat_dom. 1 hit.
PROSITE	PS50889. S4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1WJ35_VEREI

Accession

Primary (citable) accession number: A1WJ35

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	May 29, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)