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A1WII5 (A1WII5_VEREI) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alanine racemase domain protein EMBL ABM57442.1
Gene names
Ordered Locus Names:Veis_1687
OrganismVerminephrobacter eiseniae (strain EF01-2) [Complete proteome] [HAMAP]
Taxonomic identifier391735 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Verminephrobacter

Protein attributes

Sequence length239 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. PIRSR PIRSR004848-1

Sequence similarities

Belongs to the UPF0001 family. RuleBase RU004514

Ontologies

Keywords
   LigandPyridoxal phosphate PIRSR PIRSR004848-1
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Amino acid modifications

Modified residue361N6-(pyridoxal phosphate)lysine By similarity PIRSR PIRSR004848-1

Sequences

Sequence LengthMass (Da)Tools
A1WII5 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 2AB2574D7BFBA917

FASTA23925,352
        10         20         30         40         50         60 
MTTIATNLQQ VADRMTRACM AAGRAPASVG LLAVAKTFNA DAVAQAVAAG QRAFGENYIQ 

        70         80         90        100        110        120 
EGVDKILALR AALPDAALQW HCIGPVQSNK TRLVAEHFDW VHSVDRLKIA QRLSAQRPAH 

       130        140        150        160        170        180 
LPPLQLCIQV NLDGGATKSG VTAGQLPGLL RAIAQLPRLR LRGLMSIPDP APDFQAQKAI 

       190        200        210        220        230 
HASVKRLFDQ ICASAVPGLE DFDTLSLGMT ADLEAAIWAG STLVRVGSGI FGDRPGPLR

« Hide

References

[1]"Complete sequence of chromosome 1 of Verminephrobacter eiseniae EF01-2."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., Stahl D., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: EF01-2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000542 Genomic DNA. Translation: ABM57442.1.
RefSeqYP_996460.1. NC_008786.1.

3D structure databases

ProteinModelPortalA1WII5.
ModBaseSearch...

Protein-protein interaction databases

STRINGA1WII5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4692833.
GenomeReviewsGene locus Veis_1687 in contig CP000542_GR.
KEGGvei:Veis_1687.
NMPDRfig|391735.5.peg.1595.
PATRIC24016939. VBIVerEis120356_1868.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0325.
HOGENOMHBG289671.
OMAEWHFIGA.
PhylomeDBA1WII5.

Enzyme and pathway databases

BioCycVEIS391735:VEIS_1687-MONOMER.

Family and domain databases

InterProIPR001608. Ala_racemase_N.
IPR011078. UPF0001.
[Graphical view]
KOK06997.
PANTHERPTHR10146. PP_YBL036C. 1 hit.
PfamPF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PIRSFPIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMsTIGR00044. TIGR00044. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1WII5_VEREI
AccessionPrimary (citable) accession number: A1WII5
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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