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A1WID6 (A1WID6_VEREI) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Malate synthase G HAMAP MF_00641 RuleBase RU003572
EC=2.3.3.9 HAMAP MF_00641 RuleBase RU003572
Gene names
Name:glcB HAMAP MF_00641
Ordered Locus Names:Veis_1635
OrganismVerminephrobacter eiseniae (strain EF01-2) [Complete proteome] [HAMAP]
Taxonomic identifier391735 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Verminephrobacter

Protein attributes

Sequence length742 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA. HAMAP MF_00641 RuleBase RU003572 SAAS SAAS006253

Pathway

Carbohydrate metabolism; glyoxylate cycle; (S)-malate from isocitrate: step 2/2. HAMAP MF_00641 RuleBase RU003572 SAAS SAAS006253

Subunit structure

Monomer By similarity. HAMAP MF_00641 SAAS SAAS006253

Subcellular location

Cytoplasm By similarity HAMAP MF_00641 RuleBase RU003572.

Sequence similarities

Belongs to the malate synthase family. GlcB subfamily. HAMAP MF_00641 RuleBase RU003572

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3401Proton acceptor By similarity HAMAP MF_00641
Active site6451Proton donor By similarity HAMAP MF_00641

Sequences

Sequence LengthMass (Da)Tools
A1WID6 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: BE42BB06ECF44C6D

FASTA74279,653
        10         20         30         40         50         60 
MTDHTTVCGL QVATPLLRFI EDRVLPGTGV DSAAFWQGFA AIVVDLAPRN LALLAERERL 

        70         80         90        100        110        120 
QTALDAWHQA NPGPIGDMAA YRSFLEKIGY LLPPIAQVQA STTGVDDELA TQAGPQLVVP 

       130        140        150        160        170        180 
ILNARYALNA ANARWGSLYD ALYGTDVIPD TGATAKGRGY NPVRGAKVIA FARQVLDEHV 

       190        200        210        220        230        240 
PLASGAHRDA TGYRVADGQL LVALPGGAST GLAHPGQFKG YQGNAASPSS VLLQHNGLHL 

       250        260        270        280        290        300 
DIRIDRSTPI GQTDAAGVSD LVLEAALSTI LDLEDSVAAV DARDKLLGYS NWLGIIQGTL 

       310        320        330        340        350        360 
TEQLTKDGRS FTRGLNPDRI YTGPRGGTVR LHGRSLMFLR NVGHLMTNPA IRYTDAQGRQ 

       370        380        390        400        410        420 
REIPEGIMDA VVTTAIALHD LRKVHGAGAA QIRNSRQGSV YIVKPKMHGP VEVGFANELF 

       430        440        450        460        470        480 
GRVEQLLGLP AHTVKLGIMD EERRTSVNLK ACIAAASARV AFINTGFLDR TGDEIHTAMH 

       490        500        510        520        530        540 
AGAMVRKGDM KASAWIQAYE KNNVLVGLAC GLRGKAQIGK GMWAMPDLMA DMLRQKIAHP 

       550        560        570        580        590        600 
QAGANTAWVP SPTGATLHAL HYHQVKVSEV QIALEKIDAN AEHDNLLAGL LTVPVAAQAN 

       610        620        630        640        650        660 
WSEAEKQQEL DNNVQGILGY VVRWVDQGVG CSKVPDIHNV GLMEDRATLR ISSQHIANWL 

       670        680        690        700        710        720 
LHGVVTPAQV RATFERMAAV VDRQNAGDPL YQPMAGHFET SLAYQAACDL VFKGLAQPSG 

       730        740 
YTEPLLHAWR QQRKAAPAAP AA

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References

[1]"Complete sequence of chromosome 1 of Verminephrobacter eiseniae EF01-2."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., Stahl D., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: EF01-2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000542 Genomic DNA. Translation: ABM57393.1.
RefSeqYP_996411.1. NC_008786.1.

3D structure databases

ProteinModelPortalA1WID6.
SMRA1WID6. Positions 1-736.
ModBaseSearch...

Protein-protein interaction databases

STRINGA1WID6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4690728.
GenomeReviewsGene locus Veis_1635 in contig CP000542_GR.
KEGGvei:Veis_1635.
NMPDRfig|391735.5.peg.1542.
PATRIC24016819. VBIVerEis120356_1808.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2225.
HOGENOMHBG350005.
OMAENANWSV.
PhylomeDBA1WID6.
ProtClustDBPRK02999.

Enzyme and pathway databases

BioCycVEIS391735:VEIS_1635-MONOMER.

Family and domain databases

HAMAPMF_00641. Malate_synth_G.
[Tree]
InterProIPR011076. Malate_synth-like.
IPR023310. Malate_synth_G_beta_sub_dom.
IPR001465. Malate_synthase.
IPR006253. Malate_synthG.
[Graphical view]
Gene3DG3DSA:2.170.170.11. Malate_synth_G_beta_sub_dom. 2 hits.
KOK01638.
PANTHERPTHR21631:SF1. Malate_synthase. 1 hit.
PfamPF01274. Malate_synthase. 1 hit.
[Graphical view]
SUPFAMSSF51645. Malat_synth_like. 1 hit.
TIGRFAMsTIGR01345. Malate_syn_G. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1WID6_VEREI
AccessionPrimary (citable) accession number: A1WID6
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: December 14, 2011
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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