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Protein
Submitted name:

Type II site-specific deoxyribonuclease

Gene

Veis_0524

Organism
Verminephrobacter eiseniae (strain EF01-2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA restriction-modification system Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciVEIS391735:GHY5-526-MONOMER.

Protein family/group databases

REBASEi14487. VeiORF523P.

Names & Taxonomyi

Protein namesi
Submitted name:
Type II site-specific deoxyribonucleaseImported (EC:3.1.21.4Imported)
Gene namesi
Ordered Locus Names:Veis_0524Imported
OrganismiVerminephrobacter eiseniae (strain EF01-2)Imported
Taxonomic identifieri391735 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVerminephrobacter
ProteomesiUP000000374 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi391735.Veis_0524.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG43681.
KOiK01155.
OrthoDBiEOG63C0S1.

Family and domain databases

InterProiIPR007636. Restrct_endonuc_II_XhoI.
[Graphical view]
PfamiPF04555. XhoI. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1WFA1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPLNLCDYEN KTSDAIKAFW QTRDDARSKQ KESGKADQGE RAAVTGGKNM
60 70 80 90 100
HGVSRLVVDL VKANGLPNAQ VHQQRAVLTL PGYFRPTKLW DLLVIDNGRL
110 120
IAAVEFKSHV GPSFGNDFNN RTGSPG
Length:126
Mass (Da):13,822
Last modified:February 5, 2007 - v1
Checksum:i92C9E133196612F2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000542 Genomic DNA. Translation: ABM56308.1.
RefSeqiYP_995326.1. NC_008786.1.

Genome annotation databases

EnsemblBacteriaiABM56308; ABM56308; Veis_0524.
KEGGivei:Veis_0524.
PATRICi24014382. VBIVerEis120356_0595.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000542 Genomic DNA. Translation: ABM56308.1.
RefSeqiYP_995326.1. NC_008786.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi391735.Veis_0524.

Protein family/group databases

REBASEi14487. VeiORF523P.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABM56308; ABM56308; Veis_0524.
KEGGivei:Veis_0524.
PATRICi24014382. VBIVerEis120356_0595.

Phylogenomic databases

eggNOGiNOG43681.
KOiK01155.
OrthoDBiEOG63C0S1.

Enzyme and pathway databases

BioCyciVEIS391735:GHY5-526-MONOMER.

Family and domain databases

InterProiIPR007636. Restrct_endonuc_II_XhoI.
[Graphical view]
PfamiPF04555. XhoI. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 1 of Verminephrobacter eiseniae EF01-2."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M.
    , Hauser L., Kyrpides N., Kim E., Stahl D., Richardson P.
    Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: EF01-2Imported.

Entry informationi

Entry nameiA1WFA1_VEREI
AccessioniPrimary (citable) accession number: A1WFA1
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2007
Last sequence update: February 5, 2007
Last modified: March 31, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.