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A1W9B0

- TYPH2_ACISJ

UniProt

A1W9B0 - TYPH2_ACISJ

Protein

Putative thymidine phosphorylase 2

Gene

Ajs_2690

Organism
Acidovorax sp. (strain JS42)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 49 (01 Oct 2014)
      Sequence version 1 (06 Feb 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Thymidine + phosphate = thymine + 2-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

    GO - Molecular functioni

    1. phosphorylase activity Source: InterPro
    2. thymidine phosphorylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. pyrimidine nucleobase metabolic process Source: InterPro
    2. pyrimidine nucleoside metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Enzyme and pathway databases

    BioCyciASP232721:GHWE-2727-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative thymidine phosphorylase 2UniRule annotation (EC:2.4.2.4UniRule annotation)
    Alternative name(s):
    TdRPase 2UniRule annotation
    Gene namesi
    Ordered Locus Names:Ajs_2690
    OrganismiAcidovorax sp. (strain JS42)
    Taxonomic identifieri232721 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAcidovorax
    ProteomesiUP000000645: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 513513Putative thymidine phosphorylase 2PRO_0000314695Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi232721.Ajs_2690.

    Structurei

    3D structure databases

    ProteinModelPortaliA1W9B0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0213.
    HOGENOMiHOG000252767.
    KOiK00758.
    OMAiIHYNDEA.
    OrthoDBiEOG61ZTGG.

    Family and domain databases

    Gene3Di3.40.1030.10. 1 hit.
    3.90.1170.30. 1 hit.
    HAMAPiMF_00703. Thymid_phosp_2.
    InterProiIPR000312. Glycosyl_Trfase_fam3.
    IPR017459. Glycosyl_Trfase_fam3_N_dom.
    IPR013102. PYNP_C.
    IPR000053. Pyrmidine_PPase.
    IPR017872. Pyrmidine_PPase_CS.
    IPR028579. Thym_Pase_Put.
    IPR013466. Thymidine/AMP_Pase.
    [Graphical view]
    PANTHERiPTHR10515. PTHR10515. 1 hit.
    PfamiPF00591. Glycos_transf_3. 1 hit.
    PF07831. PYNP_C. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000478. TP_PyNP. 1 hit.
    SMARTiSM00941. PYNP_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF47648. SSF47648. 1 hit.
    SSF52418. SSF52418. 1 hit.
    SSF54680. SSF54680. 1 hit.
    TIGRFAMsiTIGR02645. ARCH_P_rylase. 1 hit.
    PROSITEiPS00647. THYMID_PHOSPHORYLASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A1W9B0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTAQMHEAGR TKEAGNRLQA WRTGIDTYQE PVVYMRRDCP VCRSEGFTTQ    50
    ARVQLTAGGR SIVATLSVVD GDWLAENVAG LSESAWASLG AQPGEPVAVT 100
    HAPPLDSLSH VRAKVYGNSL GDAQFGAIIS DVAAGRYSDL HLATFITACA 150
    GDRLDLAETL SLTKAMIAVG DRIDWGRPLV VDKHCVGGLP GNRTTLLVVP 200
    IVTACGLMMP KTSSRAITSP AGTADTMEVL APVNLDVPSM RRVVERTGGC 250
    IVWGGSVRLS PADDILIRVE RPLDLDSEGQ LVASVLSKKA AAGSTHVLID 300
    LPVGATAKVR SAHAAASLGR RLQEVGGAIG LQVFLRVTDG EQPVGRGIGP 350
    ALEARDVLAV LQGTREAPAD LRERALRLAA DILEMGGAAP AGGGLKLATE 400
    VLADGRAWAK FQAICSEQGG LRSLPMAAHL HTVESPGTGR VTRIDNRLLA 450
    RAAKLAGAPT APAAGIDVHA RLGDRVEAGQ PLFTLHAQAP GELAYALEFV 500
    RARPPIFQIS ENV 513
    Length:513
    Mass (Da):53,719
    Last modified:February 6, 2007 - v1
    Checksum:iEEA4E3707AC03BAE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000539 Genomic DNA. Translation: ABM42835.1.
    RefSeqiWP_011805859.1. NC_008782.1.
    YP_986911.1. NC_008782.1.

    Genome annotation databases

    EnsemblBacteriaiABM42835; ABM42835; Ajs_2690.
    GeneIDi4671304.
    KEGGiajs:Ajs_2690.
    PATRICi20690733. VBIAciSp27161_2891.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000539 Genomic DNA. Translation: ABM42835.1 .
    RefSeqi WP_011805859.1. NC_008782.1.
    YP_986911.1. NC_008782.1.

    3D structure databases

    ProteinModelPortali A1W9B0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 232721.Ajs_2690.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABM42835 ; ABM42835 ; Ajs_2690 .
    GeneIDi 4671304.
    KEGGi ajs:Ajs_2690.
    PATRICi 20690733. VBIAciSp27161_2891.

    Phylogenomic databases

    eggNOGi COG0213.
    HOGENOMi HOG000252767.
    KOi K00758.
    OMAi IHYNDEA.
    OrthoDBi EOG61ZTGG.

    Enzyme and pathway databases

    BioCyci ASP232721:GHWE-2727-MONOMER.

    Family and domain databases

    Gene3Di 3.40.1030.10. 1 hit.
    3.90.1170.30. 1 hit.
    HAMAPi MF_00703. Thymid_phosp_2.
    InterProi IPR000312. Glycosyl_Trfase_fam3.
    IPR017459. Glycosyl_Trfase_fam3_N_dom.
    IPR013102. PYNP_C.
    IPR000053. Pyrmidine_PPase.
    IPR017872. Pyrmidine_PPase_CS.
    IPR028579. Thym_Pase_Put.
    IPR013466. Thymidine/AMP_Pase.
    [Graphical view ]
    PANTHERi PTHR10515. PTHR10515. 1 hit.
    Pfami PF00591. Glycos_transf_3. 1 hit.
    PF07831. PYNP_C. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000478. TP_PyNP. 1 hit.
    SMARTi SM00941. PYNP_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47648. SSF47648. 1 hit.
    SSF52418. SSF52418. 1 hit.
    SSF54680. SSF54680. 1 hit.
    TIGRFAMsi TIGR02645. ARCH_P_rylase. 1 hit.
    PROSITEi PS00647. THYMID_PHOSPHORYLASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome 1 of Acidovorax sp. JS42."
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M.
      , Hauser L., Kyrpides N., Kim E., Stahl D., Richardson P.
      Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JS42.

    Entry informationi

    Entry nameiTYPH2_ACISJ
    AccessioniPrimary (citable) accession number: A1W9B0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 15, 2008
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 49 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3