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A1W631

- TYPH1_ACISJ

UniProt

A1W631 - TYPH1_ACISJ

Protein

Putative thymidine phosphorylase 1

Gene

Ajs_1507

Organism
Acidovorax sp. (strain JS42)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 50 (01 Oct 2014)
      Sequence version 1 (06 Feb 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Thymidine + phosphate = thymine + 2-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

    GO - Molecular functioni

    1. phosphorylase activity Source: InterPro
    2. thymidine phosphorylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. pyrimidine nucleobase metabolic process Source: InterPro
    2. pyrimidine nucleoside metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Enzyme and pathway databases

    BioCyciASP232721:GHWE-1524-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative thymidine phosphorylase 1UniRule annotation (EC:2.4.2.4UniRule annotation)
    Alternative name(s):
    TdRPase 1UniRule annotation
    Gene namesi
    Ordered Locus Names:Ajs_1507
    OrganismiAcidovorax sp. (strain JS42)
    Taxonomic identifieri232721 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAcidovorax
    ProteomesiUP000000645: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 511511Putative thymidine phosphorylase 1PRO_0000314694Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi232721.Ajs_1507.

    Structurei

    3D structure databases

    ProteinModelPortaliA1W631.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0213.
    HOGENOMiHOG000252767.
    KOiK00758.
    OMAiFICISEG.
    OrthoDBiEOG61ZTGG.

    Family and domain databases

    Gene3Di3.40.1030.10. 1 hit.
    3.90.1170.30. 1 hit.
    HAMAPiMF_00703. Thymid_phosp_2.
    InterProiIPR000312. Glycosyl_Trfase_fam3.
    IPR017459. Glycosyl_Trfase_fam3_N_dom.
    IPR013102. PYNP_C.
    IPR000053. Pyrmidine_PPase.
    IPR017872. Pyrmidine_PPase_CS.
    IPR028579. Thym_Pase_Put.
    IPR013466. Thymidine/AMP_Pase.
    [Graphical view]
    PANTHERiPTHR10515. PTHR10515. 1 hit.
    PfamiPF02885. Glycos_trans_3N. 1 hit.
    PF00591. Glycos_transf_3. 1 hit.
    PF07831. PYNP_C. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000478. TP_PyNP. 1 hit.
    SMARTiSM00941. PYNP_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF47648. SSF47648. 1 hit.
    SSF52418. SSF52418. 1 hit.
    SSF54680. SSF54680. 1 hit.
    TIGRFAMsiTIGR02645. ARCH_P_rylase. 1 hit.
    PROSITEiPS00647. THYMID_PHOSPHORYLASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A1W631-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSDHAMNEQR DHDTRLRAWR TGIDTYQEPI VYMRSDCVVC RSEGFTTQTR    50
    VLLTAGTRSA VATLNVVEGN WLAPGVAGLS EAAWHALDPA ADAWINVSYA 100
    PTLDSLSHVR AKVYGHRLDA GAFNAVIGDV AAGRYSDLYL AAFVTACAGD 150
    RLDLSETVAL TRAMVAVGHR LDWGRETVVD KHCVGGLPGN RTTLLVVPIV 200
    AACGLTMPKT SSRAITSPAG TADTMEVLAP VNLDIAAMRR TVERTGGCIV 250
    WGGSVRLSPA DDVLIRVERP LDLDSEGQLV ASVLSKKAAA GSTHVLIDLP 300
    VGPTAKVRST EAAQSLGRRL VEVGRAIGLQ VTLRITDGLQ PVGRGVGPAL 350
    EARDVLAVLR GQADAPDDLR QRALRLAGDI LELGGAAPNG SGLQLAAEVL 400
    ADGRAWAKFQ AICEAQGGLR EVPVTPYRQV ITAAVAGRVA AIDNRVLARA 450
    AKLAGAPKAP AAGVDVHARI GDPVQAGQPL FTLHAQTAGE LDYAGHFVDT 500
    RPPIFQISEE A 511
    Length:511
    Mass (Da):53,758
    Last modified:February 6, 2007 - v1
    Checksum:i4F0DA967C6F9962D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000539 Genomic DNA. Translation: ABM41706.1.
    RefSeqiWP_011804787.1. NC_008782.1.
    YP_985782.1. NC_008782.1.

    Genome annotation databases

    EnsemblBacteriaiABM41706; ABM41706; Ajs_1507.
    GeneIDi4671546.
    KEGGiajs:Ajs_1507.
    PATRICi20688342. VBIAciSp27161_1713.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000539 Genomic DNA. Translation: ABM41706.1 .
    RefSeqi WP_011804787.1. NC_008782.1.
    YP_985782.1. NC_008782.1.

    3D structure databases

    ProteinModelPortali A1W631.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 232721.Ajs_1507.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABM41706 ; ABM41706 ; Ajs_1507 .
    GeneIDi 4671546.
    KEGGi ajs:Ajs_1507.
    PATRICi 20688342. VBIAciSp27161_1713.

    Phylogenomic databases

    eggNOGi COG0213.
    HOGENOMi HOG000252767.
    KOi K00758.
    OMAi FICISEG.
    OrthoDBi EOG61ZTGG.

    Enzyme and pathway databases

    BioCyci ASP232721:GHWE-1524-MONOMER.

    Family and domain databases

    Gene3Di 3.40.1030.10. 1 hit.
    3.90.1170.30. 1 hit.
    HAMAPi MF_00703. Thymid_phosp_2.
    InterProi IPR000312. Glycosyl_Trfase_fam3.
    IPR017459. Glycosyl_Trfase_fam3_N_dom.
    IPR013102. PYNP_C.
    IPR000053. Pyrmidine_PPase.
    IPR017872. Pyrmidine_PPase_CS.
    IPR028579. Thym_Pase_Put.
    IPR013466. Thymidine/AMP_Pase.
    [Graphical view ]
    PANTHERi PTHR10515. PTHR10515. 1 hit.
    Pfami PF02885. Glycos_trans_3N. 1 hit.
    PF00591. Glycos_transf_3. 1 hit.
    PF07831. PYNP_C. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000478. TP_PyNP. 1 hit.
    SMARTi SM00941. PYNP_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47648. SSF47648. 1 hit.
    SSF52418. SSF52418. 1 hit.
    SSF54680. SSF54680. 1 hit.
    TIGRFAMsi TIGR02645. ARCH_P_rylase. 1 hit.
    PROSITEi PS00647. THYMID_PHOSPHORYLASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome 1 of Acidovorax sp. JS42."
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M.
      , Hauser L., Kyrpides N., Kim E., Stahl D., Richardson P.
      Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JS42.

    Entry informationi

    Entry nameiTYPH1_ACISJ
    AccessioniPrimary (citable) accession number: A1W631
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 15, 2008
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3