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A1W2W6 (A1W2W6_ACISJ) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Malate synthase G HAMAP MF_00641 RuleBase RU003572
EC=2.3.3.9 HAMAP MF_00641 RuleBase RU003572
Gene names
Name:glcB HAMAP MF_00641
Ordered Locus Names:Ajs_0338
OrganismAcidovorax sp. (strain JS42) [Complete proteome] [HAMAP]
Taxonomic identifier232721 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Acidovorax

Protein attributes

Sequence length733 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA. HAMAP MF_00641 RuleBase RU003572 SAAS SAAS006253

Pathway

Carbohydrate metabolism; glyoxylate cycle; (S)-malate from isocitrate: step 2/2. HAMAP MF_00641 RuleBase RU003572 SAAS SAAS006253

Subunit structure

Monomer By similarity. HAMAP MF_00641 SAAS SAAS006253

Subcellular location

Cytoplasm By similarity HAMAP MF_00641 RuleBase RU003572.

Sequence similarities

Belongs to the malate synthase family. GlcB subfamily. HAMAP MF_00641 RuleBase RU003572

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3401Proton acceptor By similarity HAMAP MF_00641
Active site6381Proton donor By similarity HAMAP MF_00641

Sequences

Sequence LengthMass (Da)Tools
A1W2W6 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: CC990E5E1DF7A58F

FASTA73378,467
        10         20         30         40         50         60 
MTARTHVHGL QVANELHAFI NEQVLPGTGV EPAAFWKGFD ALVADLAPKN AALLAERDRL 

        70         80         90        100        110        120 
QKELDTWHKA NPGPIQDMAG YRAFLSQIGY LVEPPKGAQA TTTNVDAELA IQAGPQLVVP 

       130        140        150        160        170        180 
ILNARYALNA ANARWGSLYD ALYGTDVIGE EGGAEKGKGY NPVRGAKVIA FARDFLDQAA 

       190        200        210        220        230        240 
PLASGSHKDA TAYKVEGGTL AVTLQGGATT GLKNAAQFVG YQGNAAEPSS VLLVNNGLHI 

       250        260        270        280        290        300 
DIRVDRNTPI GKGDAAGVAD VVVEAALSTI LDLEDSVAAV DAEDKVLGYS NWLGILKGTL 

       310        320        330        340        350        360 
TDTFDKGGKQ VTRGLNPDRE YTGADGKPVK LHGRSLMFVR NVGHLMTNPA ILWGGEGKEI 

       370        380        390        400        410        420 
PEGILDAMVT TAIAIHDLKG GAGGIRNSRT GSVYIVKPKM HGPAEVAFAN ELFGRVEQVL 

       430        440        450        460        470        480 
GLPANTVKLG IMDEERRTSV NLKACIAAAP ARVAFINTGF LDRTGDEIHT AMQAGPMIRK 

       490        500        510        520        530        540 
GDMKSSAWIQ AYERNNVLVG LSMGLSGRAQ IGKGMWAAPD LMKAMLEQKI AHPKAGANTA 

       550        560        570        580        590        600 
WVPNPTGATL HALHYHQVNV AAVQAELLKV DADAERDNLL TGLLTVPVSS NPNWSETEKQ 

       610        620        630        640        650        660 
QELDNNIQGI LGYVVRWIDQ GVGCSKVPDI NDIGLMEDRA TLRISSQHVA NWLLHGVVTE 

       670        680        690        700        710        720 
GQVRATFERM AAKVDQQNSG DPLYQRMHGR FAESMAYQAA CDLVFKGVEQ PSGYTEPLLH 

       730 
AWRQKVKAAQ KKA

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References

[1]"Complete sequence of chromosome 1 of Acidovorax sp. JS42."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., Stahl D., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000539 Genomic DNA. Translation: ABM40591.1.
RefSeqYP_984667.1. NC_008782.1.

3D structure databases

ProteinModelPortalA1W2W6.
SMRA1W2W6. Positions 10-730.
ModBaseSearch...

Protein-protein interaction databases

STRINGA1W2W6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4673671.
GenomeReviewsGene locus Ajs_0338 in contig CP000539_GR.
KEGGajs:Ajs_0338.
PATRIC20685898. VBIAciSp27161_0507.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2225.
HOGENOMHBG350005.
OMAENANWSV.
PhylomeDBA1W2W6.
ProtClustDBPRK02999.

Family and domain databases

HAMAPMF_00641. Malate_synth_G.
[Tree]
InterProIPR011076. Malate_synth-like.
IPR023310. Malate_synth_G_beta_sub_dom.
IPR001465. Malate_synthase.
IPR006253. Malate_synthG.
[Graphical view]
Gene3DG3DSA:2.170.170.11. Malate_synth_G_beta_sub_dom. 2 hits.
KOK01638.
PANTHERPTHR21631:SF1. Malate_synthase. 1 hit.
PfamPF01274. Malate_synthase. 1 hit.
[Graphical view]
SUPFAMSSF51645. Malat_synth_like. 1 hit.
TIGRFAMsTIGR01345. Malate_syn_G. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1W2W6_ACISJ
AccessionPrimary (citable) accession number: A1W2W6
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: December 14, 2011
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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