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A1VSS6 (A1VSS6_POLNA) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Shikimate dehydrogenase 2 HAMAP MF_00222
EC=1.1.1.25 HAMAP MF_00222
Gene names
Name:aroE2 HAMAP MF_00222
Ordered Locus Names:Pnap_3407
OrganismPolaromonas naphthalenivorans (strain CJ2) [Complete proteome] [HAMAP]
Taxonomic identifier365044 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Polaromonas

Protein attributes

Sequence length286 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding133 – 1375NADP By similarity HAMAP MF_00222

Sites

Active site721Proton acceptor By similarity HAMAP MF_00222

Sequences

Sequence LengthMass (Da)Tools
A1VSS6 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: DC0F79A3E39560D9

FASTA28629,951
        10         20         30         40         50         60 
MTSDNAAIDR YFVLGNPIAH SRSPQIHARF AELAGQAIDY QRCLVPLDGF AATLAQLVQD 

        70         80         90        100        110        120 
GVRGCNVTVP FKFEAFQAAN TRSDRAQLAQ AVNTLVMENS KIHADNTDGV GLVNDIQVNA 

       130        140        150        160        170        180 
GVPLAGRDVL LIGAGGAGAG VLGPLLAAGP RRLVLVNRTL AKAEALAARH RAHASLQTVL 

       190        200        210        220        230        240 
QKTELLVQEP HAVEGEFDVI VNASASSLAG SAVPVAGSVL KPGALAYDMM YGPAAAGFMA 

       250        260        270        280 
WAREHGASPR DGLGMLVEQA AESFSLWRGV RPPAAQVLQE LRLLLA

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References

[1]"Complete sequence of chromosome 1 of Polaromonas naphthalenivorans CJ2."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D.R., Brettin T., Bruce D., Han C., Tapia R., Brainard J., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Madsen E.L., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CJ2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000529 Genomic DNA. Translation: ABM38704.1.
RefSeqYP_983625.1. NC_008781.1.

3D structure databases

ProteinModelPortalA1VSS6.
ModBaseSearch...

Protein-protein interaction databases

STRINGA1VSS6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4686945.
GenomeReviewsGene locus Pnap_3407 in contig CP000529_GR.
KEGGpna:Pnap_3407.
PATRIC22951535. VBIPolNap76733_4288.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0169.
HOGENOMHBG553408.
OMAVVFGNPI.
PhylomeDBA1VSS6.
ProtClustDBPRK00258.

Enzyme and pathway databases

BioCycPNAP365044:PNAP_3407-MONOMER.

Family and domain databases

HAMAPMF_00222. Shikimate_DH_AroE.
[Tree]
InterProIPR016040. NAD(P)-bd_dom.
IPR011342. Shikimate_DH.
IPR013708. Shikimate_DH-bd_N.
IPR022893. Shikimate_quinate_DH.
IPR006151. Shikm_DH/Glu-tRNA_Rdtase.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KOK00014.
PfamPF01488. Shikimate_DH. 1 hit.
PF08501. Shikimate_dh_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR00507. AroE. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1VSS6_POLNA
AccessionPrimary (citable) accession number: A1VSS6
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: December 14, 2011
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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