ID   A1VNB5_POLNA            Unreviewed;       368 AA.
AC   A1VNB5;
DT   06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT   06-FEB-2007, sequence version 1.
DT   27-MAR-2024, entry version 68.
DE   SubName: Full=Transposase, IS605 OrfB family {ECO:0000313|EMBL:ABM37143.1};
GN   OrderedLocusNames=Pnap_1833 {ECO:0000313|EMBL:ABM37143.1};
OS   Polaromonas naphthalenivorans (strain CJ2).
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Polaromonas.
OX   NCBI_TaxID=365044 {ECO:0000313|EMBL:ABM37143.1, ECO:0000313|Proteomes:UP000000644};
RN   [1] {ECO:0000313|Proteomes:UP000000644}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CJ2 {ECO:0000313|Proteomes:UP000000644};
RX   PubMed=19453698; DOI=10.1111/j.1462-2920.2009.01947.x;
RA   Yagi J.M., Sims D., Brettin T., Bruce D., Madsen E.L.;
RT   "The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal
RT   tar-contaminated sediment, reveals physiological and metabolic versatility
RT   and evolution through extensive horizontal gene transfer.";
RL   Environ. Microbiol. 11:2253-2270(2009).
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DR   EMBL; CP000529; ABM37143.1; -; Genomic_DNA.
DR   RefSeq; WP_011801224.1; NC_008781.1.
DR   AlphaFoldDB; A1VNB5; -.
DR   STRING; 365044.Pnap_1833; -.
DR   KEGG; pna:Pnap_1833; -.
DR   eggNOG; COG0675; Bacteria.
DR   HOGENOM; CLU_032903_3_2_4; -.
DR   OrthoDB; 5560528at2; -.
DR   Proteomes; UP000000644; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   InterPro; IPR010095; Cas12f1-like_TNB.
DR   NCBIfam; NF040570; guided_TnpB; 1.
DR   NCBIfam; TIGR01766; IS200/IS605 family accessory protein TnpB-like domain; 1.
DR   PANTHER; PTHR30405:SF11; TNPB-LIKE PROTEIN MJ1635; 1.
DR   PANTHER; PTHR30405; TRANSPOSASE; 1.
DR   Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000644}.
FT   DOMAIN          277..346
FT                   /note="Cas12f1-like TNB"
FT                   /evidence="ECO:0000259|Pfam:PF07282"
SQ   SEQUENCE   368 AA;  41277 MW;  B495D7E359D8A0C7 CRC64;
     MKLVANIKLT PTPEQAEALR ATLERCNEAC NWLSEQAFAT KTTRQYDMHK SFYAQVRERF
     GLSAQATVRC IAKVADAYKI DQKTLRVFRK HAAQPYDDRI LSFKPDDIVS LWVLSGRTKV
     GYVCGDHQRK MLVYRKGEVD LMLVRGQWYL AAVCDFDDPA LLTPGGMLGV DFGIVNIATD
     SLGKQHSGAA VEAYRARYAK RRTTLQSVGT KAAKRCLRKM SGKQRRFHKH ENHCISKSIV
     ATAERSGLGI ALEDLTHIRA RAKAHKEQRK RLHNWSFAQL RGFVEYKARQ AGVLCESVDP
     RYTSQQCFAC GHIARQNRKS QSKFLCVACG HGDHADHNAA GNIASRATVN KPMFAHLYVP
     GAVESPLL
//