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Protein
Submitted name:

Transposase, IS605 OrfB family

Gene

Pnap_1833

Organism
Polaromonas naphthalenivorans (strain CJ2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciPNAP365044:GJ8X-1861-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transposase, IS605 OrfB familyImported
Gene namesi
Ordered Locus Names:Pnap_1833Imported
OrganismiPolaromonas naphthalenivorans (strain CJ2)Imported
Taxonomic identifieri365044 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaePolaromonas
ProteomesiUP000000644: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi365044.Pnap_1833.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0675.
HOGENOMiHOG000228800.
OMAiPDNRESE.
OrthoDBiEOG6VHZBW.

Family and domain databases

InterProiIPR001959. Transposase_2.
IPR010095. Transposase_IS605_OrfB_C.
[Graphical view]
PfamiPF01385. OrfB_IS605. 1 hit.
PF07282. OrfB_Zn_ribbon. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01766. tspaseT_teng_C. 1 hit.

Sequencei

Sequence statusi: Complete.

A1VNB5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLVANIKLT PTPEQAEALR ATLERCNEAC NWLSEQAFAT KTTRQYDMHK
60 70 80 90 100
SFYAQVRERF GLSAQATVRC IAKVADAYKI DQKTLRVFRK HAAQPYDDRI
110 120 130 140 150
LSFKPDDIVS LWVLSGRTKV GYVCGDHQRK MLVYRKGEVD LMLVRGQWYL
160 170 180 190 200
AAVCDFDDPA LLTPGGMLGV DFGIVNIATD SLGKQHSGAA VEAYRARYAK
210 220 230 240 250
RRTTLQSVGT KAAKRCLRKM SGKQRRFHKH ENHCISKSIV ATAERSGLGI
260 270 280 290 300
ALEDLTHIRA RAKAHKEQRK RLHNWSFAQL RGFVEYKARQ AGVLCESVDP
310 320 330 340 350
RYTSQQCFAC GHIARQNRKS QSKFLCVACG HGDHADHNAA GNIASRATVN
360
KPMFAHLYVP GAVESPLL
Length:368
Mass (Da):41,277
Last modified:February 6, 2007 - v1
Checksum:iB495D7E359D8A0C7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000529 Genomic DNA. Translation: ABM37143.1.
RefSeqiYP_982064.1. NC_008781.1.

Genome annotation databases

EnsemblBacteriaiABM37143; ABM37143; Pnap_1833.
GeneIDi4688429.
KEGGipna:Pnap_1833.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000529 Genomic DNA. Translation: ABM37143.1.
RefSeqiYP_982064.1. NC_008781.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi365044.Pnap_1833.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABM37143; ABM37143; Pnap_1833.
GeneIDi4688429.
KEGGipna:Pnap_1833.

Phylogenomic databases

eggNOGiCOG0675.
HOGENOMiHOG000228800.
OMAiPDNRESE.
OrthoDBiEOG6VHZBW.

Enzyme and pathway databases

BioCyciPNAP365044:GJ8X-1861-MONOMER.

Family and domain databases

InterProiIPR001959. Transposase_2.
IPR010095. Transposase_IS605_OrfB_C.
[Graphical view]
PfamiPF01385. OrfB_IS605. 1 hit.
PF07282. OrfB_Zn_ribbon. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01766. tspaseT_teng_C. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CJ2Imported.

Entry informationi

Entry nameiA1VNB5_POLNA
AccessioniPrimary (citable) accession number: A1VNB5
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: March 4, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.