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A1VNB5 (A1VNB5_POLNA) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Pnap_1833 EMBL ABM37143.1
OrganismPolaromonas naphthalenivorans (strain CJ2) [Complete proteome] [HAMAP] EMBL ABM37143.1
Taxonomic identifier365044 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaePolaromonas

Protein attributes

Sequence length368 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
A1VNB5 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: B495D7E359D8A0C7

FASTA36841,277
        10         20         30         40         50         60 
MKLVANIKLT PTPEQAEALR ATLERCNEAC NWLSEQAFAT KTTRQYDMHK SFYAQVRERF 

        70         80         90        100        110        120 
GLSAQATVRC IAKVADAYKI DQKTLRVFRK HAAQPYDDRI LSFKPDDIVS LWVLSGRTKV 

       130        140        150        160        170        180 
GYVCGDHQRK MLVYRKGEVD LMLVRGQWYL AAVCDFDDPA LLTPGGMLGV DFGIVNIATD 

       190        200        210        220        230        240 
SLGKQHSGAA VEAYRARYAK RRTTLQSVGT KAAKRCLRKM SGKQRRFHKH ENHCISKSIV 

       250        260        270        280        290        300 
ATAERSGLGI ALEDLTHIRA RAKAHKEQRK RLHNWSFAQL RGFVEYKARQ AGVLCESVDP 

       310        320        330        340        350        360 
RYTSQQCFAC GHIARQNRKS QSKFLCVACG HGDHADHNAA GNIASRATVN KPMFAHLYVP 


GAVESPLL 

« Hide

References

[1]"Complete sequence of chromosome 1 of Polaromonas naphthalenivorans CJ2."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D.R., Brettin T., Bruce D., Han C., Tapia R., Brainard J., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Madsen E.L., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CJ2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000529 Genomic DNA. Translation: ABM37143.1.
RefSeqYP_982064.1. NC_008781.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING365044.Pnap_1833.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM37143; ABM37143; Pnap_1833.
GeneID4688429.
KEGGpna:Pnap_1833.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0675.
HOGENOMHOG000228800.
OMAPDNRESE.
OrthoDBEOG6VHZBW.
ProtClustDBCLSK2771554.

Enzyme and pathway databases

BioCycPNAP365044:GJ8X-1861-MONOMER.

Family and domain databases

InterProIPR001959. Transposase_2.
IPR010095. Transposase_IS605_OrfB_C.
[Graphical view]
PfamPF01385. OrfB_IS605. 1 hit.
PF07282. OrfB_Zn_ribbon. 1 hit.
[Graphical view]
TIGRFAMsTIGR01766. tspaseT_teng_C. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1VNB5_POLNA
AccessionPrimary (citable) accession number: A1VNB5
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: November 13, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)