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A1VLY8 (A1VLY8_POLNA) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glutaminyl-tRNA synthetase EMBL ABM36666.1
EC=6.1.1.18 EMBL ABM36666.1
Gene names
Ordered Locus Names:Pnap_1351
OrganismPolaromonas naphthalenivorans (strain CJ2) [Complete proteome] [HAMAP]
Taxonomic identifier365044 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Polaromonas

Protein attributes

Sequence length625 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-glutamine + tRNA(Gln) = AMP + diphosphate + L-glutaminyl-tRNA(Gln). SAAS SAAS020059

Subunit structure

Monomer By similarity. SAAS SAAS020059

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. RuleBase RU003489

Sequences

Sequence LengthMass (Da)Tools
A1VLY8 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 6358C28782B4D80B

FASTA62569,617
        10         20         30         40         50         60 
MTSPAPSQAA AAAPVAADKE AHKSSNFLRQ IIEKDLLEGT YAARRWGGSP GDAAHHAAGQ 

        70         80         90        100        110        120 
PDPAKVRLRF PPEPNGYLHV GHAKSICLNF GLARDYGGVC HLRFDDTNPE KEDTEYVDSI 

       130        140        150        160        170        180 
KDAVQWLGFD WHNAGPNGEE VNLYQASDYF DFMYRAAEYL IDAGHAYVDE QSADEMRVNR 

       190        200        210        220        230        240 
GDFVKPGTDS PFRSRTPAEN LARFREMRDG QLPDGAAVLR AKIDMASPNI NMRDPAIYRI 

       250        260        270        280        290        300 
RRAHHHNTGD KWCIYPMYTY AHPIEDALEQ ITHSICTLEF EDQRPFYDWL LDRLAEGGLI 

       310        320        330        340        350        360 
ATPHPRQYEF ARLNLTYVLT SKRKLAQLVN ENRVTGWDDP RMPTIVGLRR RGYTPEAIQL 

       370        380        390        400        410        420 
FAERIGVTKS DSWIDYSTLE GCLRETLDGS APRAMAVLDP VKLVLTNWDE VMGLGTLDDC 

       430        440        450        460        470        480 
SAPIHPHHPE LGKRDFKIGK EVWIDRSDYE ETPPKGFFRL FPPHVNASKQ AIAGSKVRLK 

       490        500        510        520        530        540 
YGHVIECTGA VKDADGKVIE VQATLIPDTK SGTPGADSVK VKGVITWVGV NDAVPAEVRL 

       550        560        570        580        590        600 
YERLFREAQP EGGGVDFLTN LNADSLKVMT AYVEPSLASG GAIEAKADDK FQFERHGYFV 

       610        620 
ADRVDHAAGR PVFNLAVGLK DSWGK

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References

[1]"Complete sequence of chromosome 1 of Polaromonas naphthalenivorans CJ2."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D.R., Brettin T., Bruce D., Han C., Tapia R., Brainard J., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Madsen E.L., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CJ2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000529 Genomic DNA. Translation: ABM36666.1.
RefSeqYP_981587.1. NC_008781.1.

3D structure databases

ProteinModelPortalA1VLY8.
ModBaseSearch...

Protein-protein interaction databases

STRINGA1VLY8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4686573.
GenomeReviewsGene locus Pnap_1351 in contig CP000529_GR.
KEGGpna:Pnap_1351.
PATRIC22947303. VBIPolNap76733_2202.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0008.
HOGENOMHBG334108.
OMARMPTIAG.
PhylomeDBA1VLY8.
ProtClustDBPRK05347.

Enzyme and pathway databases

BioCycPNAP365044:PNAP_1351-MONOMER.

Family and domain databases

HAMAPMF_00126. Gln_tRNA_synth.
[Tree]
InterProIPR001412. aa-tRNA-synth_I_CS.
IPR004514. Gln-tRNA-synth_Ib.
IPR022861. Gln_tRNA_synth_bac.
IPR000924. Glu/Gln-tRNA-synth_Ib.
IPR020061. Glu/Gln-tRNA-synth_Ib_a-bdl.
IPR020058. Glu/Gln-tRNA-synth_Ib_cat-dom.
IPR020059. Glu/Gln-tRNA-synth_Ib_codon-bd.
IPR020056. Rbsml_L25/Gln-tRNA_synth_b-brl.
IPR011035. Ribosomal_L25/Gln-tRNA_synth.
IPR014729. Rossmann-like_a/b/a_fold.
[Graphical view]
Gene3DG3DSA:1.10.1160.10. Glu/Gln-tRNA-synth_Ic_a-bdl. 1 hit.
G3DSA:2.40.240.10. Rbsml_L25/Gln-tRNA_synth_b-brl. 2 hits.
G3DSA:3.40.50.620. Rossmann-like_a/b/a_fold. 2 hits.
KOK01886.
PANTHERPTHR10119. Glu_tRNA-synt_1c. 1 hit.
PfamPF00749. tRNA-synt_1c. 1 hit.
PF03950. tRNA-synt_1c_C. 1 hit.
[Graphical view]
PRINTSPR00987. TRNASYNTHGLU.
SUPFAMSSF50715. Ribosomal_L25rel. 1 hit.
TIGRFAMsTIGR00440. GlnS. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1VLY8_POLNA
AccessionPrimary (citable) accession number: A1VLY8
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: December 14, 2011
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info