A1VCE9 (A1VCE9_DESVV) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Succinyl-CoA ligase [ADP-forming] subunit alpha RuleBase RU000699
EC=6.2.1.5 RuleBase RU000699

Gene names

Ordered Locus Names:

Dvul_1095 EMBL ABM28115.1

Organism

Desulfovibrio vulgaris subsp. vulgaris (strain DP4) [Complete proteome] [HAMAP] EMBL ABM28115.1

Taxonomic identifier

391774 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Desulfovibrionales › Desulfovibrionaceae › Desulfovibrio › Desulfovibrio vulgaris

Protein attributes

Sequence length	691 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + succinate + CoA = ADP + phosphate + succinyl-CoA. RuleBase RU000699
Subunit structure	Heterotetramer of two alpha and two beta subunits By similarity. RuleBase RU000699
Sequence similarities	Belongs to the succinate/malate CoA ligase alpha subunit family. RuleBase RU000677

Ontologies

Keywords
Ligand	ATP-binding RuleBase RU000699 Nucleotide-binding
Molecular function	Ligase RuleBase RU000677 EMBL ABM28115.1
PTM	Phosphoprotein RuleBase RU000677
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATP citrate synthase activity Inferred from electronic annotation. Source: InterPro cofactor binding Inferred from electronic annotation. Source: InterPro succinate-CoA ligase (ADP-forming) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1VCE9 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: EB4B7E1F134E3C95	FASTA	691	72,786
	10 20 30 40 50 60 MFLNEHQSKR LFEEAGIETP QGIMTDSAGI EGCLPPFDAP WFVKAQVLAG GRGKAGGVRR 70 80 90 100 110 120 ADDLAGLRDV AKDILGMRIG GHAVPFVRIE PATAIARECY VSFMVSRKRR ELLFTASGSG 130 140 150 160 170 180 GVEVESGQGA LVRAVPLTGE MPEHVIRSAF FCTGVGREHW AGFREFVLRL HGAVRDYGLL 190 200 210 220 230 240 LAEVNPLVLT GDGRWLALDG KVEVDDNVVD IRPDLLRFHT PEHLAPEENA AREAGLSYVE 250 260 270 280 290 300 LKGWVGLLVN GAGLAMATMD LLNFSGLAAA NFMDLGGAAD VPRMRRALEL LFGNPQVRVV 310 320 330 340 350 360 CVNLFGGIVS CAAVAGALVE ALGDGRAAKP VVVRMDGFEA AEGRQLLERR AHPDVHVARD 370 380 390 400 410 420 IDHALDLLRH LRPADAPDIV FTPGTEKPVP RIHGGAAGTR RGTPHLGKGA RVLVQGITGR 430 440 450 460 470 480 SAQLHTRLML DYGTNIVAGV TPFKGGQVTQ GVPVYDSVHE ACRQHDIDAT ILFVPAAFAA 490 500 510 520 530 540 DSLLEAVAEG IPWAVCITEG IPQKDMLRAL RVARGARTRI IGPNTPGIIV PGACKVGIMP 550 560 570 580 590 600 GNVFSPGPLA VFSRSGTLTY EAAARLSAAG IGQSLCAGVG GDPYIGSDFV SLCELVRDDE 610 620 630 640 650 660 ATQGVLVLGE VGGTAEEELA AWVRETAFPK PVVSFVAGRT APPGRRLGHA GAILDEADGG 670 680 690 IAGKVRALCD AGIAVCPDLG SLPAAVRQAL R

References

[1]

"Contribution of mobile genetic elements to Desulfovibrio vulgaris genome plasticity." Walker C.B., Stolyar S., Chivian D., Pinel N., Gabster J.A., Dehal P.S., He Z., Yang Z.K., Yen H.C., Zhou J., Wall J.D., Hazen T.C., Arkin A.P., Stahl D.A. Environ. Microbiol. 11:2244-2252(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DP4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000527 Genomic DNA. Translation: ABM28115.1.
RefSeq	YP_966542.1. NC_008751.1.
3D structure databases
ProteinModelPortal	A1VCE9.
ModBase	Search...
Protein-protein interaction databases
STRING	391774.Dvul_1095.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABM28115; ABM28115; Dvul_1095.
GeneID	4662928.
KEGG	dvl:Dvul_1095.
PATRIC	21765993. VBIDesVul62463_1285.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0045.
HOGENOM	HOG000227941.
KO	K01902.
OMA	DSVHEAC.
ProtClustDB	CLSK705610.
Enzyme and pathway databases
BioCyc	DVUL391774:GHS0-1181-MONOMER.
Family and domain databases
Gene3D	3.30.1490.20. 1 hit. 3.30.470.20. 1 hit. 3.40.50.261. 2 hits. 3.40.50.720. 1 hit.
InterPro	IPR013650. ATP-grasp_succ-CoA_synth-type. IPR013815. ATP_grasp_subdomain_1. IPR013816. ATP_grasp_subdomain_2. IPR017440. Cit_synth/succinyl-CoA_lig_AS. IPR003781. CoA-bd. IPR005810. CoA_lig_alpha. IPR005811. CoA_ligase. IPR016040. NAD(P)-bd_dom. IPR016102. Succinyl-CoA_synth-like. [Graphical view]
Pfam	PF08442. ATP-grasp_2. 1 hit. PF02629. CoA_binding. 1 hit. PF00549. Ligase_CoA. 2 hits. [Graphical view]
PRINTS	PR01798. SCOASYNTHASE.
SMART	SM00881. CoA_binding. 1 hit. [Graphical view]
SUPFAM	SSF52210. CoA_ligase. 2 hits.
TIGRFAMs	TIGR01019. sucCoAalpha. 1 hit.
PROSITE	PS00399. SUCCINYL_COA_LIG_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1VCE9_DESVV

Accession

Primary (citable) accession number: A1VCE9

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	May 1, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)