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A1VCE9

- A1VCE9_DESVV

UniProt

A1VCE9 - A1VCE9_DESVV

Protein

Succinyl-CoA ligase [ADP-forming] subunit alpha

Gene

Dvul_1095

Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 54 (01 Oct 2014)
      Sequence version 1 (06 Feb 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + succinate + CoA = ADP + phosphate + succinyl-CoA.UniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. ATP citrate synthase activity Source: InterPro
    3. cofactor binding Source: InterPro
    4. succinate-CoA ligase (ADP-forming) activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    LigaseUniRule annotationImported

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciDVUL391774:GHS0-1135-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Succinyl-CoA ligase [ADP-forming] subunit alphaUniRule annotation (EC:6.2.1.5UniRule annotation)
    Gene namesi
    Ordered Locus Names:Dvul_1095Imported
    OrganismiDesulfovibrio vulgaris subsp. vulgaris (strain DP4)Imported
    Taxonomic identifieri391774 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
    ProteomesiUP000009173: Chromosome

    Interactioni

    Subunit structurei

    Heterotetramer of two alpha and two beta subunits.UniRule annotation
    Heterotetramer of two alpha and two beta subunits By similarity.

    Protein-protein interaction databases

    STRINGi391774.Dvul_1095.

    Structurei

    3D structure databases

    ProteinModelPortaliA1VCE9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the succinate/malate CoA ligase alpha subunit family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0045.
    HOGENOMiHOG000227941.
    KOiK01902.
    OMAiDSVHEAC.
    OrthoDBiEOG644ZT0.

    Family and domain databases

    Gene3Di3.30.1490.20. 1 hit.
    3.30.470.20. 1 hit.
    3.40.50.261. 2 hits.
    3.40.50.720. 1 hit.
    InterProiIPR013650. ATP-grasp_succ-CoA_synth-type.
    IPR013815. ATP_grasp_subdomain_1.
    IPR013816. ATP_grasp_subdomain_2.
    IPR017440. Cit_synth/succinyl-CoA_lig_AS.
    IPR003781. CoA-bd.
    IPR005810. CoA_lig_alpha.
    IPR005811. CoA_ligase.
    IPR016040. NAD(P)-bd_dom.
    IPR016102. Succinyl-CoA_synth-like.
    [Graphical view]
    PfamiPF08442. ATP-grasp_2. 1 hit.
    PF02629. CoA_binding. 1 hit.
    PF00549. Ligase_CoA. 2 hits.
    [Graphical view]
    PRINTSiPR01798. SCOASYNTHASE.
    SMARTiSM00881. CoA_binding. 1 hit.
    [Graphical view]
    SUPFAMiSSF52210. SSF52210. 2 hits.
    TIGRFAMsiTIGR01019. sucCoAalpha. 1 hit.
    PROSITEiPS00399. SUCCINYL_COA_LIG_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A1VCE9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MFLNEHQSKR LFEEAGIETP QGIMTDSAGI EGCLPPFDAP WFVKAQVLAG    50
    GRGKAGGVRR ADDLAGLRDV AKDILGMRIG GHAVPFVRIE PATAIARECY 100
    VSFMVSRKRR ELLFTASGSG GVEVESGQGA LVRAVPLTGE MPEHVIRSAF 150
    FCTGVGREHW AGFREFVLRL HGAVRDYGLL LAEVNPLVLT GDGRWLALDG 200
    KVEVDDNVVD IRPDLLRFHT PEHLAPEENA AREAGLSYVE LKGWVGLLVN 250
    GAGLAMATMD LLNFSGLAAA NFMDLGGAAD VPRMRRALEL LFGNPQVRVV 300
    CVNLFGGIVS CAAVAGALVE ALGDGRAAKP VVVRMDGFEA AEGRQLLERR 350
    AHPDVHVARD IDHALDLLRH LRPADAPDIV FTPGTEKPVP RIHGGAAGTR 400
    RGTPHLGKGA RVLVQGITGR SAQLHTRLML DYGTNIVAGV TPFKGGQVTQ 450
    GVPVYDSVHE ACRQHDIDAT ILFVPAAFAA DSLLEAVAEG IPWAVCITEG 500
    IPQKDMLRAL RVARGARTRI IGPNTPGIIV PGACKVGIMP GNVFSPGPLA 550
    VFSRSGTLTY EAAARLSAAG IGQSLCAGVG GDPYIGSDFV SLCELVRDDE 600
    ATQGVLVLGE VGGTAEEELA AWVRETAFPK PVVSFVAGRT APPGRRLGHA 650
    GAILDEADGG IAGKVRALCD AGIAVCPDLG SLPAAVRQAL R 691
    Length:691
    Mass (Da):72,786
    Last modified:February 6, 2007 - v1
    Checksum:iEB4B7E1F134E3C95
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000527 Genomic DNA. Translation: ABM28115.1.
    RefSeqiWP_011792056.1. NC_008751.1.
    YP_966542.1. NC_008751.1.

    Genome annotation databases

    EnsemblBacteriaiABM28115; ABM28115; Dvul_1095.
    GeneIDi4662928.
    KEGGidvl:Dvul_1095.
    PATRICi21765993. VBIDesVul62463_1285.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000527 Genomic DNA. Translation: ABM28115.1 .
    RefSeqi WP_011792056.1. NC_008751.1.
    YP_966542.1. NC_008751.1.

    3D structure databases

    ProteinModelPortali A1VCE9.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 391774.Dvul_1095.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABM28115 ; ABM28115 ; Dvul_1095 .
    GeneIDi 4662928.
    KEGGi dvl:Dvul_1095.
    PATRICi 21765993. VBIDesVul62463_1285.

    Phylogenomic databases

    eggNOGi COG0045.
    HOGENOMi HOG000227941.
    KOi K01902.
    OMAi DSVHEAC.
    OrthoDBi EOG644ZT0.

    Enzyme and pathway databases

    BioCyci DVUL391774:GHS0-1135-MONOMER.

    Family and domain databases

    Gene3Di 3.30.1490.20. 1 hit.
    3.30.470.20. 1 hit.
    3.40.50.261. 2 hits.
    3.40.50.720. 1 hit.
    InterProi IPR013650. ATP-grasp_succ-CoA_synth-type.
    IPR013815. ATP_grasp_subdomain_1.
    IPR013816. ATP_grasp_subdomain_2.
    IPR017440. Cit_synth/succinyl-CoA_lig_AS.
    IPR003781. CoA-bd.
    IPR005810. CoA_lig_alpha.
    IPR005811. CoA_ligase.
    IPR016040. NAD(P)-bd_dom.
    IPR016102. Succinyl-CoA_synth-like.
    [Graphical view ]
    Pfami PF08442. ATP-grasp_2. 1 hit.
    PF02629. CoA_binding. 1 hit.
    PF00549. Ligase_CoA. 2 hits.
    [Graphical view ]
    PRINTSi PR01798. SCOASYNTHASE.
    SMARTi SM00881. CoA_binding. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52210. SSF52210. 2 hits.
    TIGRFAMsi TIGR01019. sucCoAalpha. 1 hit.
    PROSITEi PS00399. SUCCINYL_COA_LIG_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DP4Imported.

    Entry informationi

    Entry nameiA1VCE9_DESVV
    AccessioniPrimary (citable) accession number: A1VCE9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 6, 2007
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 54 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3