Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

A1VCE9 (A1VCE9_DESVV) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Succinyl-CoA ligase [ADP-forming] subunit alpha RuleBase RU000699

EC=6.2.1.5 RuleBase RU000699
Gene names
Ordered Locus Names:Dvul_1095 EMBL ABM28115.1
OrganismDesulfovibrio vulgaris subsp. vulgaris (strain DP4) [Complete proteome] [HAMAP] EMBL ABM28115.1
Taxonomic identifier391774 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio

Protein attributes

Sequence length691 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + succinate + CoA = ADP + phosphate + succinyl-CoA.

Subunit structure

Heterotetramer of two alpha and two beta subunits By similarity.

Sequence similarities

Belongs to the succinate/malate CoA ligase alpha subunit family. RuleBase RU000677

Sequences

Sequence LengthMass (Da)Tools
A1VCE9 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: EB4B7E1F134E3C95

FASTA69172,786
        10         20         30         40         50         60 
MFLNEHQSKR LFEEAGIETP QGIMTDSAGI EGCLPPFDAP WFVKAQVLAG GRGKAGGVRR 

        70         80         90        100        110        120 
ADDLAGLRDV AKDILGMRIG GHAVPFVRIE PATAIARECY VSFMVSRKRR ELLFTASGSG 

       130        140        150        160        170        180 
GVEVESGQGA LVRAVPLTGE MPEHVIRSAF FCTGVGREHW AGFREFVLRL HGAVRDYGLL 

       190        200        210        220        230        240 
LAEVNPLVLT GDGRWLALDG KVEVDDNVVD IRPDLLRFHT PEHLAPEENA AREAGLSYVE 

       250        260        270        280        290        300 
LKGWVGLLVN GAGLAMATMD LLNFSGLAAA NFMDLGGAAD VPRMRRALEL LFGNPQVRVV 

       310        320        330        340        350        360 
CVNLFGGIVS CAAVAGALVE ALGDGRAAKP VVVRMDGFEA AEGRQLLERR AHPDVHVARD 

       370        380        390        400        410        420 
IDHALDLLRH LRPADAPDIV FTPGTEKPVP RIHGGAAGTR RGTPHLGKGA RVLVQGITGR 

       430        440        450        460        470        480 
SAQLHTRLML DYGTNIVAGV TPFKGGQVTQ GVPVYDSVHE ACRQHDIDAT ILFVPAAFAA 

       490        500        510        520        530        540 
DSLLEAVAEG IPWAVCITEG IPQKDMLRAL RVARGARTRI IGPNTPGIIV PGACKVGIMP 

       550        560        570        580        590        600 
GNVFSPGPLA VFSRSGTLTY EAAARLSAAG IGQSLCAGVG GDPYIGSDFV SLCELVRDDE 

       610        620        630        640        650        660 
ATQGVLVLGE VGGTAEEELA AWVRETAFPK PVVSFVAGRT APPGRRLGHA GAILDEADGG 

       670        680        690 
IAGKVRALCD AGIAVCPDLG SLPAAVRQAL R 

« Hide

References

[1]"Contribution of mobile genetic elements to Desulfovibrio vulgaris genome plasticity."
Walker C.B., Stolyar S., Chivian D., Pinel N., Gabster J.A., Dehal P.S., He Z., Yang Z.K., Yen H.C., Zhou J., Wall J.D., Hazen T.C., Arkin A.P., Stahl D.A.
Environ. Microbiol. 11:2244-2252(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DP4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000527 Genomic DNA. Translation: ABM28115.1.
RefSeqYP_966542.1. NC_008751.1.

3D structure databases

ProteinModelPortalA1VCE9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING391774.Dvul_1095.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM28115; ABM28115; Dvul_1095.
GeneID4662928.
KEGGdvl:Dvul_1095.
PATRIC21765993. VBIDesVul62463_1285.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0045.
HOGENOMHOG000227941.
KOK01902.
OMADSVHEAC.
OrthoDBEOG644ZT0.
ProtClustDBCLSK705610.

Enzyme and pathway databases

BioCycDVUL391774:GHS0-1135-MONOMER.

Family and domain databases

Gene3D3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
3.40.50.261. 2 hits.
3.40.50.720. 1 hit.
InterProIPR013650. ATP-grasp_succ-CoA_synth-type.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR017440. Cit_synth/succinyl-CoA_lig_AS.
IPR003781. CoA-bd.
IPR005810. CoA_lig_alpha.
IPR005811. CoA_ligase.
IPR016040. NAD(P)-bd_dom.
IPR016102. Succinyl-CoA_synth-like.
[Graphical view]
PfamPF08442. ATP-grasp_2. 1 hit.
PF02629. CoA_binding. 1 hit.
PF00549. Ligase_CoA. 2 hits.
[Graphical view]
PRINTSPR01798. SCOASYNTHASE.
SMARTSM00881. CoA_binding. 1 hit.
[Graphical view]
SUPFAMSSF52210. SSF52210. 2 hits.
TIGRFAMsTIGR01019. sucCoAalpha. 1 hit.
PROSITEPS00399. SUCCINYL_COA_LIG_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1VCE9_DESVV
AccessionPrimary (citable) accession number: A1VCE9
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: November 13, 2013
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)