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Protein

Glycogen synthase

Gene

glgA

Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi: glycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei17ADP-glucoseUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:Dvul_0998
OrganismiDesulfovibrio vulgaris subsp. vulgaris (strain DP4)
Taxonomic identifieri391774 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
Proteomesi
  • UP000009173 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000143501 – 489Glycogen synthaseAdd BLAST489

Structurei

3D structure databases

ProteinModelPortaliA1VC53.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000294941.
KOiK00703.
OMAiLLNAMRC.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth. 1 hit.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

A1VC53-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQRQVVFATS EMYPFSKSGG LGDVLGALPL ALHRMGVPTA VVTPFYGRLR
60 70 80 90 100
TADYPIRLTV SDCHVGYPWA PITCDVFEAD YHGMPVYFIH RGEYFDRRYY
110 120 130 140 150
YNDHKGDYFD NCERFVFFCR ALLALMRRLG QPPAVLHAHD WQTALVPAFL
160 170 180 190 200
YFLRQGDPFW QDTRSVLTIH NLAFQGRFAS RLFETSGLPP QAWSVDGAEF
210 220 230 240 250
WGDFNLLKAG IAYADKVTTV SPSYAREILG PAYGSGLDGI LRKRAHALHG
260 270 280 290 300
ILNGADYDIW SPGNDRFLPC RYTPTDLAGK AQCKRALIEE LGLDPHLARR
310 320 330 340 350
PILGFIGRLR GQKGIDLLLD ILPRLMESDV GVIILGEGNL THEARALELM
360 370 380 390 400
EAYRGRVCTI VSYTEDLAHR IQAGSDIFLM PSRYEPCGLT QMYALRYGTP
410 420 430 440 450
PVATAVGGLR DTIVPWPSPE STGFTFGRCE SAAFLRAILD AVHLWTTAPG
460 470 480
DWQGMVRRAM AQAFTWERAG RAYLDLYAQL GVSPGEEGA
Length:489
Mass (Da):54,634
Last modified:February 6, 2007 - v1
Checksum:i9A5017F89C7F88CD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000527 Genomic DNA. Translation: ABM28019.1.
RefSeqiWP_011791977.1. NC_008751.1.

Genome annotation databases

EnsemblBacteriaiABM28019; ABM28019; Dvul_0998.
KEGGidvl:Dvul_0998.
PATRICi21765779. VBIDesVul62463_1184.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000527 Genomic DNA. Translation: ABM28019.1.
RefSeqiWP_011791977.1. NC_008751.1.

3D structure databases

ProteinModelPortaliA1VC53.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABM28019; ABM28019; Dvul_0998.
KEGGidvl:Dvul_0998.
PATRICi21765779. VBIDesVul62463_1184.

Phylogenomic databases

HOGENOMiHOG000294941.
KOiK00703.
OMAiLLNAMRC.

Enzyme and pathway databases

UniPathwayiUPA00164.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth. 1 hit.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiGLGA_DESVV
AccessioniPrimary (citable) accession number: A1VC53
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: February 6, 2007
Last modified: November 2, 2016
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.