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A1VC53 (GLGA_DESVV) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Dvul_0998
OrganismDesulfovibrio vulgaris subsp. vulgaris (strain DP4) [Complete proteome] [HAMAP]
Taxonomic identifier391774 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio

Protein attributes

Sequence length489 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 489489Glycogen synthase HAMAP-Rule MF_00484
PRO_1000014350

Sites

Binding site171ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
A1VC53 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 9A5017F89C7F88CD

FASTA48954,634
        10         20         30         40         50         60 
MQRQVVFATS EMYPFSKSGG LGDVLGALPL ALHRMGVPTA VVTPFYGRLR TADYPIRLTV 

        70         80         90        100        110        120 
SDCHVGYPWA PITCDVFEAD YHGMPVYFIH RGEYFDRRYY YNDHKGDYFD NCERFVFFCR 

       130        140        150        160        170        180 
ALLALMRRLG QPPAVLHAHD WQTALVPAFL YFLRQGDPFW QDTRSVLTIH NLAFQGRFAS 

       190        200        210        220        230        240 
RLFETSGLPP QAWSVDGAEF WGDFNLLKAG IAYADKVTTV SPSYAREILG PAYGSGLDGI 

       250        260        270        280        290        300 
LRKRAHALHG ILNGADYDIW SPGNDRFLPC RYTPTDLAGK AQCKRALIEE LGLDPHLARR 

       310        320        330        340        350        360 
PILGFIGRLR GQKGIDLLLD ILPRLMESDV GVIILGEGNL THEARALELM EAYRGRVCTI 

       370        380        390        400        410        420 
VSYTEDLAHR IQAGSDIFLM PSRYEPCGLT QMYALRYGTP PVATAVGGLR DTIVPWPSPE 

       430        440        450        460        470        480 
STGFTFGRCE SAAFLRAILD AVHLWTTAPG DWQGMVRRAM AQAFTWERAG RAYLDLYAQL 


GVSPGEEGA 

« Hide

References

[1]"Contribution of mobile genetic elements to Desulfovibrio vulgaris genome plasticity."
Walker C.B., Stolyar S., Chivian D., Pinel N., Gabster J.A., Dehal P.S., He Z., Yang Z.K., Yen H.C., Zhou J., Wall J.D., Hazen T.C., Arkin A.P., Stahl D.A.
Environ. Microbiol. 11:2244-2252(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DP4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000527 Genomic DNA. Translation: ABM28019.1.
RefSeqYP_966446.1. NC_008751.1.

3D structure databases

ProteinModelPortalA1VC53.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING391774.Dvul_0998.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM28019; ABM28019; Dvul_0998.
GeneID4662770.
KEGGdvl:Dvul_0998.
PATRIC21765779. VBIDesVul62463_1184.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294941.
KOK00703.
OMAVHCNDWQ.
OrthoDBEOG6JTC6Z.
ProtClustDBCLSK705662.

Enzyme and pathway databases

BioCycDVUL391774:GHS0-1032-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_DESVV
AccessionPrimary (citable) accession number: A1VC53
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: February 6, 2007
Last modified: February 19, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways