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A1VBD0

- A1VBD0_DESVV

UniProt

A1VBD0 - A1VBD0_DESVV

Protein

Shikimate kinase

Gene

aroK

Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4)
Status
Unreviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 53 (01 Oct 2014)
      Sequence version 1 (06 Feb 2007)
      Previous versions | rss
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    Functioni

    Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.UniRule annotation

    Catalytic activityi

    ATP + shikimate = ADP + shikimate 3-phosphate.UniRule annotation

    Cofactori

    Binds 1 magnesium ion per subunit.UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi27 – 271MagnesiumUniRule annotation
    Binding sitei45 – 451SubstrateUniRule annotation
    Binding sitei90 – 901Substrate; via amide nitrogenUniRule annotation
    Binding sitei128 – 1281ATPUniRule annotation
    Binding sitei145 – 1451SubstrateUniRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi23 – 286ATPUniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-HAMAP
    2. magnesium ion binding Source: UniProtKB-HAMAP
    3. shikimate kinase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. aromatic amino acid family biosynthetic process Source: UniProtKB-HAMAP
    2. chorismate biosynthetic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    KinaseUniRule annotationImported, Transferase

    Keywords - Biological processi

    Amino-acid biosynthesis, Aromatic amino acid biosynthesisUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, MagnesiumUniRule annotation, Metal-bindingUniRule annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciDVUL391774:GHS0-749-MONOMER.
    UniPathwayiUPA00053; UER00088.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Shikimate kinaseUniRule annotation (EC:2.7.1.71UniRule annotation)
    Short name:
    SKUniRule annotation
    Gene namesi
    Name:aroKUniRule annotation
    Ordered Locus Names:Dvul_0723Imported
    OrganismiDesulfovibrio vulgaris subsp. vulgaris (strain DP4)Imported
    Taxonomic identifieri391774 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
    ProteomesiUP000009173: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotation

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi391774.Dvul_0723.

    Structurei

    3D structure databases

    ProteinModelPortaliA1VBD0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the shikimate kinase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0703.
    HOGENOMiHOG000032568.
    KOiK00891.
    OMAiVYGKEAM.
    OrthoDBiEOG6SJJGD.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    HAMAPiMF_00109. Shikimate_kinase.
    InterProiIPR027417. P-loop_NTPase.
    IPR000623. Shikimate_kinase/TSH1.
    [Graphical view]
    PfamiPF01202. SKI. 1 hit.
    [Graphical view]
    PRINTSiPR01100. SHIKIMTKNASE.
    SUPFAMiSSF52540. SSF52540. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A1VBD0-1 [UniParc]FASTAAdd to Basket

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    MMTRREGARL FEGCCVTIIG MAGAGKTTVG RELARQMDWA HVDTDSLIEA    50
    TYGTVLQNVA DSMSKEAFLD VEAGIICRIG AKRAVLSTGG SVVYRAEAMR 100
    HLASLGPVVY LDVSLPLILE RIARNPDRGL AIAPGQTIED LYNERKALYE 150
    TYQDFTLTAD TLTPEECGRA ILSWLETADA 180
    Length:180
    Mass (Da):19,615
    Last modified:February 6, 2007 - v1
    Checksum:iE6D5E6123780A1E6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000527 Genomic DNA. Translation: ABM27746.1.
    RefSeqiWP_010939791.1. NC_008751.1.
    YP_966173.1. NC_008751.1.

    Genome annotation databases

    EnsemblBacteriaiABM27746; ABM27746; Dvul_0723.
    GeneIDi4662778.
    KEGGidvl:Dvul_0723.
    PATRICi21765213. VBIDesVul62463_0910.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000527 Genomic DNA. Translation: ABM27746.1 .
    RefSeqi WP_010939791.1. NC_008751.1.
    YP_966173.1. NC_008751.1.

    3D structure databases

    ProteinModelPortali A1VBD0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 391774.Dvul_0723.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABM27746 ; ABM27746 ; Dvul_0723 .
    GeneIDi 4662778.
    KEGGi dvl:Dvul_0723.
    PATRICi 21765213. VBIDesVul62463_0910.

    Phylogenomic databases

    eggNOGi COG0703.
    HOGENOMi HOG000032568.
    KOi K00891.
    OMAi VYGKEAM.
    OrthoDBi EOG6SJJGD.

    Enzyme and pathway databases

    UniPathwayi UPA00053 ; UER00088 .
    BioCyci DVUL391774:GHS0-749-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    HAMAPi MF_00109. Shikimate_kinase.
    InterProi IPR027417. P-loop_NTPase.
    IPR000623. Shikimate_kinase/TSH1.
    [Graphical view ]
    Pfami PF01202. SKI. 1 hit.
    [Graphical view ]
    PRINTSi PR01100. SHIKIMTKNASE.
    SUPFAMi SSF52540. SSF52540. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DP4Imported.

    Entry informationi

    Entry nameiA1VBD0_DESVV
    AccessioniPrimary (citable) accession number: A1VBD0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 6, 2007
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 53 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3