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A1VBD0 (A1VBD0_DESVV) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length180 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate By similarity. HAMAP-Rule MF_00109

Catalytic activity

ATP + shikimate = ADP + shikimate 3-phosphate. HAMAP-Rule MF_00109

Cofactor

Binds 1 magnesium ion per subunit By similarity. HAMAP-Rule MF_00109

Pathway

Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 5/7. HAMAP-Rule MF_00109

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00109

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00109.

Sequence similarities

Belongs to the shikimate kinase family. HAMAP-Rule MF_00109

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding23 – 286ATP By similarity HAMAP-Rule MF_00109

Sites

Metal binding271Magnesium By similarity HAMAP-Rule MF_00109
Binding site451Substrate By similarity HAMAP-Rule MF_00109
Binding site901Substrate; via amide nitrogen By similarity HAMAP-Rule MF_00109
Binding site1281ATP By similarity HAMAP-Rule MF_00109
Binding site1451Substrate By similarity HAMAP-Rule MF_00109

Sequences

Sequence LengthMass (Da)Tools
A1VBD0 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: E6D5E6123780A1E6

FASTA18019,615
        10         20         30         40         50         60 
MMTRREGARL FEGCCVTIIG MAGAGKTTVG RELARQMDWA HVDTDSLIEA TYGTVLQNVA 

        70         80         90        100        110        120 
DSMSKEAFLD VEAGIICRIG AKRAVLSTGG SVVYRAEAMR HLASLGPVVY LDVSLPLILE 

       130        140        150        160        170        180 
RIARNPDRGL AIAPGQTIED LYNERKALYE TYQDFTLTAD TLTPEECGRA ILSWLETADA 

« Hide

References

[1]"Contribution of mobile genetic elements to Desulfovibrio vulgaris genome plasticity."
Walker C.B., Stolyar S., Chivian D., Pinel N., Gabster J.A., Dehal P.S., He Z., Yang Z.K., Yen H.C., Zhou J., Wall J.D., Hazen T.C., Arkin A.P., Stahl D.A.
Environ. Microbiol. 11:2244-2252(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DP4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000527 Genomic DNA. Translation: ABM27746.1.
RefSeqYP_966173.1. NC_008751.1.

3D structure databases

ProteinModelPortalA1VBD0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING391774.Dvul_0723.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM27746; ABM27746; Dvul_0723.
GeneID4662778.
KEGGdvl:Dvul_0723.
PATRIC21765213. VBIDesVul62463_0910.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0703.
HOGENOMHOG000032568.
KOK00891.
OMAVYSEKAM.
OrthoDBEOG6SJJGD.
ProtClustDBPRK00131.

Enzyme and pathway databases

BioCycDVUL391774:GHS0-749-MONOMER.
UniPathwayUPA00053; UER00088.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00109. Shikimate_kinase.
InterProIPR027417. P-loop_NTPase.
IPR000623. Shikimate_kinase/TSH1.
[Graphical view]
PfamPF01202. SKI. 1 hit.
[Graphical view]
PRINTSPR01100. SHIKIMTKNASE.
SUPFAMSSF52540. SSF52540. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1VBD0_DESVV
AccessionPrimary (citable) accession number: A1VBD0
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: April 16, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)