Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

A1VBB5

- IF3_DESVV

UniProt

A1VBB5 - IF3_DESVV

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Translation initiation factor IF-3

Gene

infC

Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.UniRule annotation

GO - Molecular functioni

  1. translation initiation factor activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Initiation factor

Keywords - Biological processi

Protein biosynthesis

Enzyme and pathway databases

BioCyciDVUL391774:GHS0-734-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Translation initiation factor IF-3UniRule annotation
Gene namesi
Name:infCUniRule annotation
Ordered Locus Names:Dvul_0708
OrganismiDesulfovibrio vulgaris subsp. vulgaris (strain DP4)
Taxonomic identifieri391774 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
ProteomesiUP000009173: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 176176Translation initiation factor IF-3PRO_1000004540Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi391774.Dvul_0708.

Structurei

3D structure databases

ProteinModelPortaliA1VBB5.
SMRiA1VBB5. Positions 13-83.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the IF-3 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0290.
HOGENOMiHOG000035157.
KOiK02520.
OMAiDRINYPK.
OrthoDBiEOG63JRGJ.

Family and domain databases

Gene3Di3.10.20.80. 1 hit.
3.30.110.10. 1 hit.
HAMAPiMF_00080. IF_3.
InterProiIPR019813. Translation_initiation_fac3_CS.
IPR001288. Translation_initiation_fac_3.
IPR019815. Translation_initiation_fac_3_C.
IPR019814. Translation_initiation_fac_3_N.
[Graphical view]
PANTHERiPTHR10938. PTHR10938. 1 hit.
PfamiPF00707. IF3_C. 1 hit.
PF05198. IF3_N. 1 hit.
[Graphical view]
SUPFAMiSSF54364. SSF54364. 1 hit.
SSF55200. SSF55200. 1 hit.
TIGRFAMsiTIGR00168. infC. 1 hit.
PROSITEiPS00938. IF3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1VBB5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRRDVPQDSV RRNEQIRARE VRLIGAEGEQ LGIISRNDAI ALAKEKGLDL
60 70 80 90 100
VEVAATADPP VCRVMDYGKY KYEQQKKKQE AKKRQTVVQI KEIKVRPKTD
110 120 130 140 150
EHDYQTKLKH VRRFLEEGDR CKVTVFFRGR EIVHKDRGLT ILDRFVEDTK
160 170
DLAKLDQEAR AEGRTLQMML APIPKK
Length:176
Mass (Da):20,497
Last modified:February 6, 2007 - v1
Checksum:i1A701385276DA3E8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000527 Genomic DNA. Translation: ABM27731.1.
RefSeqiWP_010939807.1. NC_008751.1.
YP_966158.1. NC_008751.1.

Genome annotation databases

EnsemblBacteriaiABM27731; ABM27731; Dvul_0708.
GeneIDi4663071.
KEGGidvl:Dvul_0708.
PATRICi21765183. VBIDesVul62463_0895.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000527 Genomic DNA. Translation: ABM27731.1 .
RefSeqi WP_010939807.1. NC_008751.1.
YP_966158.1. NC_008751.1.

3D structure databases

ProteinModelPortali A1VBB5.
SMRi A1VBB5. Positions 13-83.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 391774.Dvul_0708.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABM27731 ; ABM27731 ; Dvul_0708 .
GeneIDi 4663071.
KEGGi dvl:Dvul_0708.
PATRICi 21765183. VBIDesVul62463_0895.

Phylogenomic databases

eggNOGi COG0290.
HOGENOMi HOG000035157.
KOi K02520.
OMAi DRINYPK.
OrthoDBi EOG63JRGJ.

Enzyme and pathway databases

BioCyci DVUL391774:GHS0-734-MONOMER.

Family and domain databases

Gene3Di 3.10.20.80. 1 hit.
3.30.110.10. 1 hit.
HAMAPi MF_00080. IF_3.
InterProi IPR019813. Translation_initiation_fac3_CS.
IPR001288. Translation_initiation_fac_3.
IPR019815. Translation_initiation_fac_3_C.
IPR019814. Translation_initiation_fac_3_N.
[Graphical view ]
PANTHERi PTHR10938. PTHR10938. 1 hit.
Pfami PF00707. IF3_C. 1 hit.
PF05198. IF3_N. 1 hit.
[Graphical view ]
SUPFAMi SSF54364. SSF54364. 1 hit.
SSF55200. SSF55200. 1 hit.
TIGRFAMsi TIGR00168. infC. 1 hit.
PROSITEi PS00938. IF3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DP4.

Entry informationi

Entry nameiIF3_DESVV
AccessioniPrimary (citable) accession number: A1VBB5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: February 6, 2007
Last modified: October 29, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Translation initiation factors
    List of translation initiation factor entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3