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A1UTQ2 (A1UTQ2_BARBK) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase HAMAP-Rule MF_01201

EC=5.1.1.1 HAMAP-Rule MF_01201
Gene names
Name:alr EMBL ABM45232.1
Ordered Locus Names:BARBAKC583_1093 EMBL ABM45232.1
OrganismBartonella bacilliformis (strain ATCC 35685 / KC583) [Complete proteome] [HAMAP] EMBL ABM45232.1
Taxonomic identifier360095 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBartonellaceaeBartonella

Protein attributes

Sequence length373 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS001608

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site471Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2681Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1461Substrate By similarity HAMAP-Rule MF_01201
Binding site3161Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue471N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
A1UTQ2 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: B472476C7FEFD459

FASTA37340,829
        10         20         30         40         50         60 
MNQLVDYKTN AELPYTTVAT IDLGAIIANY KILAQHIAPA ECSAVVKANA YGMGAEKISS 

        70         80         90        100        110        120 
ALYQAGCRTF FVSQIQEALQ LKTILPSNIT LVLLNGFPPT TEEFVAQAGL IPVLNSWHAI 

       130        140        150        160        170        180 
ESWQMLCQKK HQKFPAIIQI DTHMNRLGLD QEELQQLIKQ PTIFEKANIK YIMSHLSNGD 

       190        200        210        220        230        240 
DATHASNDTQ LTAMKTALAQ LPTCKVSLAN SGGIFLNSDF YFDLVRPGIA LYGVDPHGKC 

       250        260        270        280        290        300 
PTPIKPVLKL ETQVIQSRHV DAGTPVGYGG SFVTSRPSTL TTISIGYADG WLRTLSNKGV 

       310        320        330        340        350        360 
VYFNGHKLPI IGRISMDSTI VDATDLECEK PKIGDWVELI GPHQTVEDVA ADADTIPYEI 

       370 
LTSLGPRCKR IYI 

« Hide

References

[1]Hendrix L., Mohamoud Y., Radune D., Shvartsbeyn A., Daugherty S., Dodson R., Durkin A.S., Harkins D., Huot H., Kothari S.P., Madupu R., Li J., Nelson W.C., Shrivastava S., Giglio M.G., Haft D., Selengut J., Fraser-Ligget C., Seshadri R.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35685 / KC583.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000524 Genomic DNA. Translation: ABM45232.1.
RefSeqYP_989355.1. NC_008783.1.

3D structure databases

ProteinModelPortalA1UTQ2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING360095.BARBAKC583_1093.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM45232; ABM45232; BARBAKC583_1093.
GeneID4684847.
KEGGbbk:BARBAKC583_1093.
PATRIC20538479. VBIBarBac6912_1055.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031445.
KOK01775.
OMAFIMSHLA.
OrthoDBEOG6PP9NJ.

Enzyme and pathway databases

BioCycBBAC360095:GHRY-1094-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1UTQ2_BARBK
AccessionPrimary (citable) accession number: A1UTQ2
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: July 9, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)