A1US56 (RS6_BARBK) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S6

Gene names

Name:	rpsF
Ordered Locus Names:	BARBAKC583_0494

Organism

Bartonella bacilliformis (strain ATCC 35685 / KC583) [Complete proteome] [HAMAP]

Taxonomic identifier

360095 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bartonellaceae › Bartonella

Protein attributes

Sequence length	136 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds together with S18 to 16S ribosomal RNA By similarity. HAMAP MF_00360
Sequence similarities	Belongs to the ribosomal protein S6P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 136	136	30S ribosomal protein S6 HAMAP MF_00360		PRO_1000005219

Sequences

	Sequence		Length	Mass (Da)
	A1US56 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: A7B025861085920C	FASTA	136	16,004
	10 20 30 40 50 60 MALYEHVFLA RQDIAPQQVD ELLKTYKNVI ESHGGKVERT ENWGLRSLAY RIRKNRKAHY 70 80 90 100 110 120 VLINIDAPAA AIAEMERQMR INEDILRYIT IRVEKHEKEQ SAMLSRPDRD DFPGKDEERP 130 RPSRRQYEDV VEGGVE

References

[1]

Hendrix L., Mohamoud Y., Radune D., Shvartsbeyn A., Daugherty S., Dodson R., Durkin A.S., Harkins D., Huot H., Kothari S.P., Madupu R., Li J., Nelson W.C., Shrivastava S., Giglio M.G., Haft D., Selengut J., Fraser-Ligget C., Seshadri R. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 35685 / KC583.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000524 Genomic DNA. Translation: ABM44636.1.
RefSeq	YP_988809.1. NC_008783.1.
3D structure databases
ProteinModelPortal	A1US56.
ModBase	Search...
Protein-protein interaction databases
STRING	A1US56.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4684511.
GenomeReviews	Gene locus BARBAKC583_0494 in contig CP000524_GR.
KEGG	bbk:BARBAKC583_0494.
NMPDR	fig|360095.3.peg.187.
PATRIC	20537259. VBIBarBac6912_0477.
TIGR	BARBAKC583_0494.
Phylogenomic databases
eggNOG	COG0360.
HOGENOM	HBG747554.
OMA	ITEASPM.
ProtClustDB	PRK00453.
Enzyme and pathway databases
BioCyc	BBAC360095:BARBAKC583_0494-MONOMER.
Family and domain databases
HAMAP	MF_00360. Ribosomal_S6. [Tree]
InterPro	IPR000529. Ribosomal_S6. IPR020814. Ribosomal_S6_plastid/chlpt. IPR014717. Transl_elong_EF1B/ribosomal_S6. [Graphical view]
Gene3D	G3DSA:3.30.70.60. Transl_elong_EF1B/rib_con. 1 hit.
KO	K02990.
Pfam	PF01250. Ribosomal_S6. 1 hit. [Graphical view]
SUPFAM	SSF54995. Ribosomal_S6. 1 hit.
TIGRFAMs	TIGR00166. S6. 1 hit.
PROSITE	PS01048. RIBOSOMAL_S6. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS6_BARBK

Accession

Primary (citable) accession number: A1US56

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	February 6, 2007
Last modified:	December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program