A1UPI3 (A1UPI3_MYCSK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA ligase (ATP) EMBL ABL94741.1
EC=6.5.1.1 EMBL ABL94741.1

Gene names

Ordered Locus Names:

Mkms_5557 EMBL ABL94741.1

Encoded on

Plasmid pMKMS01 EMBL ABL94741.1

Organism

Mycobacterium sp. (strain KMS) [Complete proteome] [HAMAP] EMBL ABL94741.1

Taxonomic identifier

189918 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium

Protein attributes

Sequence length	328 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABL94741.1
Technical term	Complete proteome Plasmid EMBL ABL94741.1
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1UPI3 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: ECC0696E19DC8F4A	FASTA	328	35,662
	10 20 30 40 50 60 MTRASLSPDR LVAPAPMLAT LGPAPRGGQF AVEVKFDGQR GILTVDRRVQ VTSRNGADIT 70 80 90 100 110 120 ETFPELSAVA AAVGGRRMVL DGEIVAVDEH GRPSFRRLQR RWPQQRRPGA QLVREVPTRF 130 140 150 160 170 180 LAFDVMNIEG EDITHWPYRE RRELLDTLMV MESSPALTVP RHWTDVAPAD MLAICADQHH 190 200 210 220 230 240 EGIVCKRLDS PYRSGRSRDW IKCPVRATTE AVIVGAFAGH RGEVGTLVLA AHDEAGQLVL 250 260 270 280 290 300 LGQVGTGFSG AERRRLATLL AGTEVSAPPV AVGASMSGVQ WFKPRYVGEV AYREYHAGKG 310 320 LRHASWKGLR SEPASGVCLP RDAGAAPG

References

[1]

"Complete sequence of plasmid pMKMS01 of Mycobacterium sp. KMS." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Miller C.D., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: KMS EMBL ABL94741.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000519 Genomic DNA. Translation: ABL94741.1.
RefSeq	YP_935556.1. NC_008703.1.
3D structure databases
ProteinModelPortal	A1UPI3.
ModBase	Search...
Protein-protein interaction databases
STRING	189918.Mkms_5557.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABL94741; ABL94741; Mkms_5557.
GeneID	4610246.
KEGG	mkm:Mkms_5557.
PATRIC	18098020. VBIMycSp70743_0064.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000222509.
KO	K01971.
OMA	VCKRLDS.
ProtClustDB	CLSK776348.
Enzyme and pathway databases
BioCyc	MSP189918:GH4X-5849-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR014146. DNA_pol_LigD_ligase_dom. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1UPI3_MYCSK

Accession

Primary (citable) accession number: A1UPI3

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)