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A1UPI3

- A1UPI3_MYCSK

UniProt

A1UPI3 - A1UPI3_MYCSK

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Protein
Submitted name:

DNA ligase (ATP)

Gene

Mkms_5557

Organism
Mycobacterium sp. (strain KMS)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMSP189918:GH4X-5614-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:Mkms_5557Imported
Encoded oniPlasmid pMKMS01Imported
OrganismiMycobacterium sp. (strain KMS)Imported
Taxonomic identifieri189918 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000000638: Plasmid pMKMS01

Interactioni

Protein-protein interaction databases

STRINGi189918.Mkms_5557.

Structurei

3D structure databases

ProteinModelPortaliA1UPI3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222509.
KOiK01971.
OMAiHARWVEP.
OrthoDBiEOG65F8PX.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1UPI3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTRASLSPDR LVAPAPMLAT LGPAPRGGQF AVEVKFDGQR GILTVDRRVQ
60 70 80 90 100
VTSRNGADIT ETFPELSAVA AAVGGRRMVL DGEIVAVDEH GRPSFRRLQR
110 120 130 140 150
RWPQQRRPGA QLVREVPTRF LAFDVMNIEG EDITHWPYRE RRELLDTLMV
160 170 180 190 200
MESSPALTVP RHWTDVAPAD MLAICADQHH EGIVCKRLDS PYRSGRSRDW
210 220 230 240 250
IKCPVRATTE AVIVGAFAGH RGEVGTLVLA AHDEAGQLVL LGQVGTGFSG
260 270 280 290 300
AERRRLATLL AGTEVSAPPV AVGASMSGVQ WFKPRYVGEV AYREYHAGKG
310 320
LRHASWKGLR SEPASGVCLP RDAGAAPG
Length:328
Mass (Da):35,662
Last modified:February 6, 2007 - v1
Checksum:iECC0696E19DC8F4A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000519 Genomic DNA. Translation: ABL94741.1.
RefSeqiWP_011767766.1. NC_008703.1.
YP_935556.1. NC_008703.1.

Genome annotation databases

EnsemblBacteriaiABL94741; ABL94741; Mkms_5557.
GeneIDi4610246.
KEGGimkm:Mkms_5557.
PATRICi18098020. VBIMycSp70743_0064.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000519 Genomic DNA. Translation: ABL94741.1 .
RefSeqi WP_011767766.1. NC_008703.1.
YP_935556.1. NC_008703.1.

3D structure databases

ProteinModelPortali A1UPI3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 189918.Mkms_5557.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABL94741 ; ABL94741 ; Mkms_5557 .
GeneIDi 4610246.
KEGGi mkm:Mkms_5557.
PATRICi 18098020. VBIMycSp70743_0064.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000222509.
KOi K01971.
OMAi HARWVEP.
OrthoDBi EOG65F8PX.

Enzyme and pathway databases

BioCyci MSP189918:GH4X-5614-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiA1UPI3_MYCSK
AccessioniPrimary (citable) accession number: A1UPI3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: October 1, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3