Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

A1UPI3

- A1UPI3_MYCSK

UniProt

A1UPI3 - A1UPI3_MYCSK

Protein
Submitted name:

DNA ligase (ATP)

Gene

Mkms_5557

Organism
Mycobacterium sp. (strain KMS)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 50 (01 Oct 2014)
      Sequence version 1 (06 Feb 2007)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMSP189918:GH4X-5614-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:Mkms_5557Imported
    Encoded oniPlasmid pMKMS01Imported
    OrganismiMycobacterium sp. (strain KMS)Imported
    Taxonomic identifieri189918 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
    ProteomesiUP000000638: Plasmid pMKMS01

    Interactioni

    Protein-protein interaction databases

    STRINGi189918.Mkms_5557.

    Structurei

    3D structure databases

    ProteinModelPortaliA1UPI3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiHARWVEP.
    OrthoDBiEOG65F8PX.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A1UPI3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTRASLSPDR LVAPAPMLAT LGPAPRGGQF AVEVKFDGQR GILTVDRRVQ    50
    VTSRNGADIT ETFPELSAVA AAVGGRRMVL DGEIVAVDEH GRPSFRRLQR 100
    RWPQQRRPGA QLVREVPTRF LAFDVMNIEG EDITHWPYRE RRELLDTLMV 150
    MESSPALTVP RHWTDVAPAD MLAICADQHH EGIVCKRLDS PYRSGRSRDW 200
    IKCPVRATTE AVIVGAFAGH RGEVGTLVLA AHDEAGQLVL LGQVGTGFSG 250
    AERRRLATLL AGTEVSAPPV AVGASMSGVQ WFKPRYVGEV AYREYHAGKG 300
    LRHASWKGLR SEPASGVCLP RDAGAAPG 328
    Length:328
    Mass (Da):35,662
    Last modified:February 6, 2007 - v1
    Checksum:iECC0696E19DC8F4A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000519 Genomic DNA. Translation: ABL94741.1.
    RefSeqiWP_011767766.1. NC_008703.1.
    YP_935556.1. NC_008703.1.

    Genome annotation databases

    EnsemblBacteriaiABL94741; ABL94741; Mkms_5557.
    GeneIDi4610246.
    KEGGimkm:Mkms_5557.
    PATRICi18098020. VBIMycSp70743_0064.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000519 Genomic DNA. Translation: ABL94741.1 .
    RefSeqi WP_011767766.1. NC_008703.1.
    YP_935556.1. NC_008703.1.

    3D structure databases

    ProteinModelPortali A1UPI3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 189918.Mkms_5557.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABL94741 ; ABL94741 ; Mkms_5557 .
    GeneIDi 4610246.
    KEGGi mkm:Mkms_5557.
    PATRICi 18098020. VBIMycSp70743_0064.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi HARWVEP.
    OrthoDBi EOG65F8PX.

    Enzyme and pathway databases

    BioCyci MSP189918:GH4X-5614-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiA1UPI3_MYCSK
    AccessioniPrimary (citable) accession number: A1UPI3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 6, 2007
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, PlasmidImported, Reference proteomeImported

    External Data

    Dasty 3