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A1UMY6 (A1UMY6_MYCSK) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Mkms_5005 EMBL ABL94194.1
OrganismMycobacterium sp. (strain KMS) [Complete proteome] [HAMAP] EMBL ABL94194.1
Taxonomic identifier189918 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium

Protein attributes

Sequence length353 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A1UMY6 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 76DAC3850601BAF4

FASTA35339,822
        10         20         30         40         50         60 
MDTMDLPVMP PLEPMLAKAQ AKVPTESGVW SYEPKWDGFR ALVFRDGDDV VLMSRSGKDL 

        70         80         90        100        110        120 
ARYFPEVLDF VRDELAPRCV LDGEIVVPRE IGGRTRLDWE SLSQRIHPAE SRVRKLSEET 

       130        140        150        160        170        180 
PAHFIGFDAL ASGDTSLMKE PFRARRQALI EAVSHKQWCH VTRTTEDPGL GAQWLEEFEG 

       190        200        210        220        230        240 
AGLDGVIAKR LDGSYLPGKR EMVKVKHARD ADCVAIGYRI HKSGEGIGSL LLGLYTDEGD 

       250        260        270        280        290        300 
LQMVGGAASF TAKDRLKLLA ELEPLREGDE VREGDPSRWN SAADKRWIPI RPERVAEVAY 

       310        320        330        340        350 
DQMEGNSVQG RRFRHAVKFR RWRPDRDPAS CTFDQLEVPL TYDLFDVLET QDG 

« Hide

References

[1]"Complete sequence of chromosome of Mycobacterium sp. KMS."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Miller C.D., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KMS EMBL ABL94194.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000518 Genomic DNA. Translation: ABL94194.1.
RefSeqYP_940984.1. NC_008705.1.

3D structure databases

ProteinModelPortalA1UMY6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING189918.Mkms_5005.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABL94194; ABL94194; Mkms_5005.
GeneID4612684.
KEGGmkm:Mkms_5005.
PATRIC18109058. VBIMycSp70743_5534.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222508.
KOK01971.
OMAYRPHKSQ.
OrthoDBEOG63NMFT.

Enzyme and pathway databases

BioCycMSP189918:GH4X-5057-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1UMY6_MYCSK
AccessionPrimary (citable) accession number: A1UMY6
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: May 14, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)