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A1UMY6

- A1UMY6_MYCSK

UniProt

A1UMY6 - A1UMY6_MYCSK

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Mkms_5005

Organism
Mycobacterium sp. (strain KMS)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 49 (01 Oct 2014)
      Sequence version 1 (06 Feb 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMSP189918:GH4X-5057-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Mkms_5005Imported
    OrganismiMycobacterium sp. (strain KMS)Imported
    Taxonomic identifieri189918 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
    ProteomesiUP000000638: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi189918.Mkms_5005.

    Structurei

    3D structure databases

    ProteinModelPortaliA1UMY6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222508.
    KOiK01971.
    OMAiYRPHKSQ.
    OrthoDBiEOG63NMFT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A1UMY6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDTMDLPVMP PLEPMLAKAQ AKVPTESGVW SYEPKWDGFR ALVFRDGDDV    50
    VLMSRSGKDL ARYFPEVLDF VRDELAPRCV LDGEIVVPRE IGGRTRLDWE 100
    SLSQRIHPAE SRVRKLSEET PAHFIGFDAL ASGDTSLMKE PFRARRQALI 150
    EAVSHKQWCH VTRTTEDPGL GAQWLEEFEG AGLDGVIAKR LDGSYLPGKR 200
    EMVKVKHARD ADCVAIGYRI HKSGEGIGSL LLGLYTDEGD LQMVGGAASF 250
    TAKDRLKLLA ELEPLREGDE VREGDPSRWN SAADKRWIPI RPERVAEVAY 300
    DQMEGNSVQG RRFRHAVKFR RWRPDRDPAS CTFDQLEVPL TYDLFDVLET 350
    QDG 353
    Length:353
    Mass (Da):39,822
    Last modified:February 6, 2007 - v1
    Checksum:i76DAC3850601BAF4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000518 Genomic DNA. Translation: ABL94194.1.
    RefSeqiYP_940984.1. NC_008705.1.

    Genome annotation databases

    EnsemblBacteriaiABL94194; ABL94194; Mkms_5005.
    GeneIDi4612684.
    KEGGimkm:Mkms_5005.
    PATRICi18109058. VBIMycSp70743_5534.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000518 Genomic DNA. Translation: ABL94194.1 .
    RefSeqi YP_940984.1. NC_008705.1.

    3D structure databases

    ProteinModelPortali A1UMY6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 189918.Mkms_5005.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABL94194 ; ABL94194 ; Mkms_5005 .
    GeneIDi 4612684.
    KEGGi mkm:Mkms_5005.
    PATRICi 18109058. VBIMycSp70743_5534.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222508.
    KOi K01971.
    OMAi YRPHKSQ.
    OrthoDBi EOG63NMFT.

    Enzyme and pathway databases

    BioCyci MSP189918:GH4X-5057-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KMSImported.

    Entry informationi

    Entry nameiA1UMY6_MYCSK
    AccessioniPrimary (citable) accession number: A1UMY6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 6, 2007
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 49 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3