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A1UMY6

- A1UMY6_MYCSK

UniProt

A1UMY6 - A1UMY6_MYCSK

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Protein
Submitted name: ATP dependent DNA ligase
Gene
Mkms_5005
Organism
Mycobacterium sp. (strain KMS)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMSP189918:GH4X-5057-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Mkms_5005Imported
OrganismiMycobacterium sp. (strain KMS)Imported
Taxonomic identifieri189918 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000000638: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi189918.Mkms_5005.

Structurei

3D structure databases

ProteinModelPortaliA1UMY6.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
KOiK01971.
OMAiYRPHKSQ.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1UMY6-1 [UniParc]FASTAAdd to Basket

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MDTMDLPVMP PLEPMLAKAQ AKVPTESGVW SYEPKWDGFR ALVFRDGDDV    50
VLMSRSGKDL ARYFPEVLDF VRDELAPRCV LDGEIVVPRE IGGRTRLDWE 100
SLSQRIHPAE SRVRKLSEET PAHFIGFDAL ASGDTSLMKE PFRARRQALI 150
EAVSHKQWCH VTRTTEDPGL GAQWLEEFEG AGLDGVIAKR LDGSYLPGKR 200
EMVKVKHARD ADCVAIGYRI HKSGEGIGSL LLGLYTDEGD LQMVGGAASF 250
TAKDRLKLLA ELEPLREGDE VREGDPSRWN SAADKRWIPI RPERVAEVAY 300
DQMEGNSVQG RRFRHAVKFR RWRPDRDPAS CTFDQLEVPL TYDLFDVLET 350
QDG 353
Length:353
Mass (Da):39,822
Last modified:February 6, 2007 - v1
Checksum:i76DAC3850601BAF4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000518 Genomic DNA. Translation: ABL94194.1.
RefSeqiYP_940984.1. NC_008705.1.

Genome annotation databases

EnsemblBacteriaiABL94194; ABL94194; Mkms_5005.
GeneIDi4612684.
KEGGimkm:Mkms_5005.
PATRICi18109058. VBIMycSp70743_5534.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000518 Genomic DNA. Translation: ABL94194.1 .
RefSeqi YP_940984.1. NC_008705.1.

3D structure databases

ProteinModelPortali A1UMY6.
ModBasei Search...

Protein-protein interaction databases

STRINGi 189918.Mkms_5005.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABL94194 ; ABL94194 ; Mkms_5005 .
GeneIDi 4612684.
KEGGi mkm:Mkms_5005.
PATRICi 18109058. VBIMycSp70743_5534.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000222508.
KOi K01971.
OMAi YRPHKSQ.
OrthoDBi EOG63NMFT.

Enzyme and pathway databases

BioCyci MSP189918:GH4X-5057-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KMSImported.

Entry informationi

Entry nameiA1UMY6_MYCSK
AccessioniPrimary (citable) accession number: A1UMY6
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: May 14, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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