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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Mkms_5005

Organism
Mycobacterium sp. (strain KMS)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciMSP189918:GH4X-5027-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Mkms_5005Imported
OrganismiMycobacterium sp. (strain KMS)Imported
Taxonomic identifieri189918 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacterium
Proteomesi
  • UP000000638 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliA1UMY6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini14 – 206DNA_LIGASE_A3InterPro annotationAdd BLAST193
Domaini224 – 326DNA_ligase_A_CInterPro annotationAdd BLAST103

Phylogenomic databases

HOGENOMiHOG000222508.
OMAiYRPHKSQ.
OrthoDBiPOG091H08HZ.

Family and domain databases

InterProiView protein in InterPro
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
PfamiView protein in Pfam
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiView protein in PROSITE
PS00697. DNA_LIGASE_A1. 1 hit.

Sequencei

Sequence statusi: Complete.

A1UMY6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDTMDLPVMP PLEPMLAKAQ AKVPTESGVW SYEPKWDGFR ALVFRDGDDV
60 70 80 90 100
VLMSRSGKDL ARYFPEVLDF VRDELAPRCV LDGEIVVPRE IGGRTRLDWE
110 120 130 140 150
SLSQRIHPAE SRVRKLSEET PAHFIGFDAL ASGDTSLMKE PFRARRQALI
160 170 180 190 200
EAVSHKQWCH VTRTTEDPGL GAQWLEEFEG AGLDGVIAKR LDGSYLPGKR
210 220 230 240 250
EMVKVKHARD ADCVAIGYRI HKSGEGIGSL LLGLYTDEGD LQMVGGAASF
260 270 280 290 300
TAKDRLKLLA ELEPLREGDE VREGDPSRWN SAADKRWIPI RPERVAEVAY
310 320 330 340 350
DQMEGNSVQG RRFRHAVKFR RWRPDRDPAS CTFDQLEVPL TYDLFDVLET

QDG
Length:353
Mass (Da):39,822
Last modified:February 6, 2007 - v1
Checksum:i76DAC3850601BAF4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000518 Genomic DNA. Translation: ABL94194.1.
RefSeqiWP_011562292.1. NC_008705.1.

Genome annotation databases

EnsemblBacteriaiABL94194; ABL94194; Mkms_5005.
GeneIDi32419349.
KEGGimkm:Mkms_5005.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiA1UMY6_MYCSK
AccessioniPrimary (citable) accession number: A1UMY6
Entry historyiIntegrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: July 5, 2017
This is version 64 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported