Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

A1ULC1 (A1ULC1_MYCSK) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Mkms_4438 EMBL ABL93629.1
OrganismMycobacterium sp. (strain KMS) [Complete proteome] [HAMAP] EMBL ABL93629.1
Taxonomic identifier189918 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium

Protein attributes

Sequence length758 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A1ULC1 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: D6A3F480B86EE82C

FASTA75884,908
        10         20         30         40         50         60 
MVDHFGRVRL TNPDKVLYPA TGTTKAEVFE YYVDVAEAMV PHIAGRAVTR KRWPNGVGEL 

        70         80         90        100        110        120 
EFFEKQLASS APDWLARGTI VHKSGTTTYP IIDTREGLAW IAQQAALEVH VPQWRFVGSG 

       130        140        150        160        170        180 
GDLTPGPATR IVFDLDPGEG VTFRQLCEVA HEVRDLITDI GLTAYPLTSG SKGLHLYVPL 

       190        200        210        220        230        240 
KEPISSQGAS VLAKRVAQQL EKAMPKQVTA TMTKSLREGK VFLDWSQNNG NKTTIAPYSL 

       250        260        270        280        290        300 
RGREHPTVAA PRTWEEIEDP DLRHLRFDEV LERIEEFGDL LADLDEYVPV EDRLTKYRSM 

       310        320        330        340        350        360 
RDPSRTPEPV PPLPPKAGNN DRFVIQEHHA RRLHYDLRLE RDGVLVSWAV PKNLPDRPSE 

       370        380        390        400        410        420 
NHLAVHTEDH PMEYLTFHGT IPKGEYGGGD MIVWDTGTYE TEKFNDHAPD GPAKGGEVII 

       430        440        450        460        470        480 
TLHGNRIDGR YALIQTDGKN WLAHRMKDQG NPTFEDFAPM LATHGSVEKF TAKQWAFEGK 

       490        500        510        520        530        540 
WDGYRLLVDA DHGKLCLKSR SGRDVTAEYP QLRALAADLA DHHVVLDGEV VALDDKGVPS 

       550        560        570        580        590        600 
FGHMQNRARS TRVEFWAFDI LRLDGRWLLK AKYRDRRKLL ETLASGGGLI VQPLLDGDGL 

       610        620        630        640        650        660 
EALEDARKRR WEGVVAKKWD STYQPGRRSS AWIKDKLWNT QEVVIGGWRE GNGGRSSGIG 

       670        680        690        700        710        720 
ALVLGIPGPD GLQFVGRVGT GFTEKELGSL KKTLAPLHTY ESPFATRLPT QDAKGVTFVR 

       730        740        750 
PELVGEVRYS ERTGDGRLRQ PSWRGLRPDK TPDDVVWE 

« Hide

References

[1]"Complete sequence of chromosome of Mycobacterium sp. KMS."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Miller C.D., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KMS EMBL ABL93629.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000518 Genomic DNA. Translation: ABL93629.1.
RefSeqYP_940419.1. NC_008705.1.

3D structure databases

ProteinModelPortalA1ULC1.
SMRA1ULC1. Positions 7-285, 454-758.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING189918.Mkms_4438.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABL93629; ABL93629; Mkms_4438.
GeneID4612381.
KEGGmkm:Mkms_4438.
PATRIC18107902. VBIMycSp70743_4965.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMASKGIHLY.
OrthoDBEOG661H49.
ProtClustDBPRK09632.

Enzyme and pathway databases

BioCycMSP189918:GH4X-4480-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1ULC1_MYCSK
AccessionPrimary (citable) accession number: A1ULC1
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: April 16, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)