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A1U6Z5

- A1U6Z5_MARHV

UniProt

A1U6Z5 - A1U6Z5_MARHV

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Maqu_3695

Organism
Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT8)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMHYD351348:GHYZ-3757-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Maqu_3695Imported
OrganismiMarinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT8)Imported
Taxonomic identifieri351348 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeMarinobacter
ProteomesiUP000000998: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3232 PotentialImportedAdd
BLAST
Chaini33 – 295263 PotentialImportedPRO_5000209387Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi351348.Maqu_3695.

Structurei

3D structure databases

ProteinModelPortaliA1U6Z5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000293070.
KOiK01971.
OMAiGKGQFEN.
OrthoDBiEOG60919Q.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A1U6Z5-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MPLCNTTRVR AMPLAFSFIV VSIFLSAFGH ASGRPPALPL ANVYHPGVNL
60 70 80 90 100
EEYWVSEKLD GVRAFWDGET LWSRGGYRYS APAWFTRQFP AQPLDGELWS
110 120 130 140 150
GRGRFAELSG VVRKVQPVDQ EWRQVRFYVF DLPEPDRPFE QRYRRLQQLV
160 170 180 190 200
TAADSRYLVL VEQRVVASHD ELMARLEQTV AAGGEGLMLK RRKSWYQAGR
210 220 230 240 250
SDDLLKVKKH QDAEATVVAH LPGKGKYEGL LGALEVELES GRRFRLGTGF
260 270 280 290
TDEERHNPPA IGARVTFRYR GLTATGLPRF ASFLRIRNDE PESIE
Length:295
Mass (Da):33,566
Last modified:February 6, 2007 - v1
Checksum:iEBCD3E41CE1CBCF3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000514 Genomic DNA. Translation: ABM20764.1.
RefSeqiYP_960951.1. NC_008740.1.

Genome annotation databases

EnsemblBacteriaiABM20764; ABM20764; Maqu_3695.
GeneIDi4654116.
KEGGimaq:Maqu_3695.
PATRICi22462766. VBIMarAqu65105_4123.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000514 Genomic DNA. Translation: ABM20764.1 .
RefSeqi YP_960951.1. NC_008740.1.

3D structure databases

ProteinModelPortali A1U6Z5.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 351348.Maqu_3695.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABM20764 ; ABM20764 ; Maqu_3695 .
GeneIDi 4654116.
KEGGi maq:Maqu_3695.
PATRICi 22462766. VBIMarAqu65105_4123.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000293070.
KOi K01971.
OMAi GKGQFEN.
OrthoDBi EOG60919Q.

Enzyme and pathway databases

BioCyci MHYD351348:GHYZ-3757-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome 1 of Marinobacter aquaeolei VT8."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J.
    , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Edwards K., Richardson P.
    Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700491 / DSM 11845 / VT8Imported.

Entry informationi

Entry nameiA1U6Z5_MARHV
AccessioniPrimary (citable) accession number: A1U6Z5
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: October 29, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3