A1U6Z5 (A1U6Z5_MARAV) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ABM20764.1

Gene names

Ordered Locus Names:

Maqu_3695 EMBL ABM20764.1

Organism

Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) (Marinobacter hydrocarbonoclasticus (strain DSM 11845)) [Complete proteome] [HAMAP] EMBL ABM20764.1

Taxonomic identifier

351348 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadaceae › Marinobacter › Marinobacter hydrocarbonoclasticus

Protein attributes

Sequence length	295 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABM20764.1
Molecular function	Ligase EMBL ABM20764.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 32	32	Potential EMBL ABM20764.1
	Chain	33 – 295	263	Potential		PRO_5000209387

Sequences

	Sequence		Length	Mass (Da)
	A1U6Z5 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: EBCD3E41CE1CBCF3	FASTA	295	33,566
	10 20 30 40 50 60 MPLCNTTRVR AMPLAFSFIV VSIFLSAFGH ASGRPPALPL ANVYHPGVNL EEYWVSEKLD 70 80 90 100 110 120 GVRAFWDGET LWSRGGYRYS APAWFTRQFP AQPLDGELWS GRGRFAELSG VVRKVQPVDQ 130 140 150 160 170 180 EWRQVRFYVF DLPEPDRPFE QRYRRLQQLV TAADSRYLVL VEQRVVASHD ELMARLEQTV 190 200 210 220 230 240 AAGGEGLMLK RRKSWYQAGR SDDLLKVKKH QDAEATVVAH LPGKGKYEGL LGALEVELES 250 260 270 280 290 GRRFRLGTGF TDEERHNPPA IGARVTFRYR GLTATGLPRF ASFLRIRNDE PESIE

References

[1]

"Complete sequence of chromosome 1 of Marinobacter aquaeolei VT8." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Edwards K., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700491 / DSM 11845 / VT8.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000514 Genomic DNA. Translation: ABM20764.1.
RefSeq	YP_960951.1. NC_008740.1.
3D structure databases
ProteinModelPortal	A1U6Z5.
ModBase	Search...
Protein-protein interaction databases
STRING	351348.Maqu_3695.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABM20764; ABM20764; Maqu_3695.
GeneID	4654116.
KEGG	maq:Maqu_3695.
PATRIC	22462766. VBIMarAqu65105_4123.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000293070.
KO	K01971.
OMA	VRGYWDG.
ProtClustDB	PRK09125.
Enzyme and pathway databases
BioCyc	MHYD351348:GHYZ-3757-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00333. DNA_LIGASE_A2. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1U6Z5_MARAV

Accession

Primary (citable) accession number: A1U6Z5

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	May 1, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)