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A1U6N4 (A1U6N4_MARAV) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length611 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000382
   Molecular functionLyase RuleBase RU000382
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarboxylic acid metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncarboxy-lyase activity

Inferred from electronic annotation. Source: InterPro

pyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A1U6N4 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: A454E02506D6E520

FASTA61168,161
        10         20         30         40         50         60 
MASLPDRSYT TQPQGTNAPL GGWQTFFATG PRPAPSDGFP EPTHRIPLNV CGAMTGKKKS 

        70         80         90        100        110        120 
AQASLEAMYR VFTVPEAPES TLSRIDQDIS RNLAGFLQEH IVAIERDLSE VEKDFSDYVI 

       130        140        150        160        170        180 
PEKPVFVSEQ TQFLLDKLVA NSVHTASPAF IGHMTSALPY FMLPLSKIMI ALNQNLVKTE 

       190        200        210        220        230        240 
TSKAFTPMER QVLGQIHRLV YQEDGSFYRK WMHDPRHALG AMCSGGTVAN LTALWVARNR 

       250        260        270        280        290        300 
AFPAEGSFRG LHEEGLFRAL KYYGHEGAAI VVSKRGHYSL RKAADVLGLG RDALVPVETD 

       310        320        330        340        350        360 
EFNRIQTDAL RDKCLELQKQ KIKIMAICGV AGTTETGNVD PLDAMADIAR EFGAHFHVDA 

       370        380        390        400        410        420 
AWGGPTLFSR THRHLLRGIE KADSVTFDAH KQLYVPMGAG LVVFKDPSLA SAVEHHAQYI 

       430        440        450        460        470        480 
IRKGSRDLGS TTLEGSRPGM AMLIHSGLKI LAREGYEILI DQGIDKAKTF ANMIDEQPDF 

       490        500        510        520        530        540 
ELVTRPELNI LTYRYCPEDV RQALAMADEL QAEKMNTCLN RITKFIQKTQ RERGKAFVSR 

       550        560        570        580        590        600 
TRLEPARYYH FPCIVFRVVL ANPLTTPDIL EDILREQREL SKEDGIADEM AILHQMAAAV 

       610 
LKQNQKEARQ A

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References

[1]"Complete sequence of chromosome 1 of Marinobacter aquaeolei VT8."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Edwards K., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700491 / DSM 11845 / VT8.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000514 Genomic DNA. Translation: ABM20653.1.
RefSeqYP_960840.1. NC_008740.1.

3D structure databases

ProteinModelPortalA1U6N4.
ModBaseSearch...

Protein-protein interaction databases

STRING351348.Maqu_3584.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM20653; ABM20653; Maqu_3584.
GeneID4654856.
KEGGmaq:Maqu_3584.
PATRIC22462540. VBIMarAqu65105_4010.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000282553.
KOK01580.
OMACHFHVDA.
ProtClustDBCLSK874231.

Enzyme and pathway databases

BioCycMHYD351348:GHYZ-3646-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1U6N4_MARAV
AccessionPrimary (citable) accession number: A1U6N4
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: May 1, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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