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Protein

Ribosomal RNA small subunit methyltransferase C

Gene

rsmC

Organism
Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT8)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle.UniRule annotation

Catalytic activityi

S-adenosyl-L-methionine + guanine(1207) in 16S rRNA = S-adenosyl-L-homocysteine + N(2)-methylguanine(1207) in 16S rRNA.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Biological processi

rRNA processing

Keywords - Ligandi

S-adenosyl-L-methionine

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase CUniRule annotation (EC:2.1.1.172UniRule annotation)
Alternative name(s):
16S rRNA m2G1207 methyltransferaseUniRule annotation
rRNA (guanine-N(2)-)-methyltransferase RsmCUniRule annotation
Gene namesi
Name:rsmCUniRule annotation
Ordered Locus Names:Maqu_1942
OrganismiMarinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT8)
Taxonomic identifieri351348 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeMarinobacter
Proteomesi
  • UP000000998 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003697261 – 351Ribosomal RNA small subunit methyltransferase CAdd BLAST351

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi351348.Maqu_1942.

Structurei

3D structure databases

ProteinModelPortaliA1U204.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the methyltransferase superfamily. RsmC family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107VE0. Bacteria.
COG2813. LUCA.
HOGENOMiHOG000218308.
KOiK00564.
OrthoDBiPOG091H05RK.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01862. 16SrRNA_methyltr_C. 1 hit.
InterProiIPR013675. Mtase_sm_N.
IPR023543. rRNA_ssu_MeTfrase_C.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
PF08468. MTS_N. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 1 hit.

Sequencei

Sequence statusi: Complete.

A1U204-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSALPNTHEV LLRNAHLLNG RPALLGVSDA SLLPRCPVPG IAMTEHAGLW
60 70 80 90 100
QILSHDTDWA GCFGYEPDRQ QQGSCDTVVV FLPKARAECE LRLALARYLG
110 120 130 140 150
KPGAALVVIG EKKEGIAGAI KQFSVVAGEV VKVDSARHCQ VWCGRNTQPL
160 170 180 190 200
TEFRLTDWLS WTELSCAGVA LSVAGLPGVF SLGRLDDGTR MLLETLAESP
210 220 230 240 250
LGVDRVFDFA CGAGVIGSWL HGFHQLAGKM PIRVDGTDVQ AQAVFCARES
260 270 280 290 300
YRKAGVNGEI FAADGLAVVQ GNWPAVISNP PFHTGVKTDT SMTEQFLAQV
310 320 330 340 350
AAHLAHGGEL RLVANSFLPY EALIRQHIGP VEKLAQDRRF TVYRAFRKKS

G
Length:351
Mass (Da):37,919
Last modified:April 14, 2009 - v2
Checksum:iA1F05C4B2027F5E9
GO

Sequence cautioni

The sequence ABM19023 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000514 Genomic DNA. Translation: ABM19023.1. Different initiation.
RefSeqiWP_041656358.1. NC_008740.1.

Genome annotation databases

EnsemblBacteriaiABM19023; ABM19023; Maqu_1942.
KEGGimaq:Maqu_1942.
PATRICi22459188. VBIMarAqu65105_2352.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000514 Genomic DNA. Translation: ABM19023.1. Different initiation.
RefSeqiWP_041656358.1. NC_008740.1.

3D structure databases

ProteinModelPortaliA1U204.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi351348.Maqu_1942.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABM19023; ABM19023; Maqu_1942.
KEGGimaq:Maqu_1942.
PATRICi22459188. VBIMarAqu65105_2352.

Phylogenomic databases

eggNOGiENOG4107VE0. Bacteria.
COG2813. LUCA.
HOGENOMiHOG000218308.
KOiK00564.
OrthoDBiPOG091H05RK.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01862. 16SrRNA_methyltr_C. 1 hit.
InterProiIPR013675. Mtase_sm_N.
IPR023543. rRNA_ssu_MeTfrase_C.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
PF08468. MTS_N. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRSMC_MARHV
AccessioniPrimary (citable) accession number: A1U204
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: April 14, 2009
Last modified: November 2, 2016
This is version 50 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.