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A1TZ05 (A1TZ05_MARAV) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length325 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pseudouridine synthase rluA family. RuleBase RU004243

Ontologies

Keywords
   Molecular functionIsomerase RuleBase RU003886 EMBL ABM17974.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpseudouridine synthesis

Inferred from electronic annotation. Source: InterPro

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: InterPro

pseudouridine synthase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A1TZ05 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 09144260A1B73932

FASTA32536,099
        10         20         30         40         50         60 
MTSENRITGQ FTVPPELSDK RLDQAAAELM PEHSRSRLQS WIKSGALTVN GKSRKPRDKV 

        70         80         90        100        110        120 
MMGDSLALDA EPEVQVTWEA EPISLDIVYE DEHLLVINKP AGLVVHPAAG HTDGTLVNAL 

       130        140        150        160        170        180 
LNYAPEVENL PRAGIVHRLD KDTSGIMVVA RSLIAHTSLV DQLQTRTMGR EYEAVVVGAL 

       190        200        210        220        230        240 
TGGATVDAPI GRHPQDRKRM AVVSSGKPAV THYRLLERFA AHTLVRCKLE SGRTHQIRVH 

       250        260        270        280        290        300 
MAHVRHPLVG DPAYGGRLRL PKGTTEELRD VLAAFTRQAL HARQLTLEHP ETGEILSWEV 

       310        320 
PLPEDMVHLI EALRKHAREL EERDF 

« Hide

References

[1]"Complete sequence of chromosome 1 of Marinobacter aquaeolei VT8."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Edwards K., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700491 / DSM 11845 / VT8.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000514 Genomic DNA. Translation: ABM17974.1.
RefSeqYP_958161.1. NC_008740.1.

3D structure databases

ProteinModelPortalA1TZ05.
SMRA1TZ05. Positions 78-320.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING351348.Maqu_0878.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM17974; ABM17974; Maqu_0878.
GeneID4656080.
KEGGmaq:Maqu_0878.
PATRIC22456980. VBIMarAqu65105_1276.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0564.
HOGENOMHOG000275919.
KOK06180.
OMARDIVHGG.
OrthoDBEOG6P070X.

Enzyme and pathway databases

BioCycMHYD351348:GHYZ-892-MONOMER.

Family and domain databases

Gene3D3.10.290.10. 1 hit.
InterProIPR020103. PsdUridine_synth_cat_dom.
IPR006225. PsdUridine_synth_RluC/D.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
IPR002942. S4_RNA-bd.
[Graphical view]
PfamPF00849. PseudoU_synth_2. 1 hit.
PF01479. S4. 1 hit.
[Graphical view]
SMARTSM00363. S4. 1 hit.
[Graphical view]
SUPFAMSSF55120. SSF55120. 1 hit.
TIGRFAMsTIGR00005. rluA_subfam. 1 hit.
PROSITEPS01129. PSI_RLU. 1 hit.
PS50889. S4. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1TZ05_MARAV
AccessionPrimary (citable) accession number: A1TZ05
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: May 14, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)