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A1TZ05

- A1TZ05_MARAV

UniProt

A1TZ05 - A1TZ05_MARAV

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Protein

Pseudouridine synthase

Gene
Maqu_0878
Organism
Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) (Marinobacter hydrocarbonoclasticus (strain DSM 11845))
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. pseudouridine synthase activity Source: InterPro
  2. RNA binding Source: InterPro

GO - Biological processi

  1. pseudouridine synthesis Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationImported

Enzyme and pathway databases

BioCyciMHYD351348:GHYZ-892-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
Gene namesi
Ordered Locus Names:Maqu_0878Imported
OrganismiMarinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) (Marinobacter hydrocarbonoclasticus (strain DSM 11845))Imported
Taxonomic identifieri351348 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeMarinobacter
ProteomesiUP000000998: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi351348.Maqu_0878.

Structurei

3D structure databases

ProteinModelPortaliA1TZ05.
SMRiA1TZ05. Positions 78-320.

Family & Domainsi

Sequence similaritiesi

Belongs to the pseudouridine synthase rluA family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0564.
HOGENOMiHOG000275919.
KOiK06180.
OMAiRDIVHGG.
OrthoDBiEOG6P070X.

Family and domain databases

Gene3Di3.10.290.10. 1 hit.
InterProiIPR020103. PsdUridine_synth_cat_dom.
IPR006225. PsdUridine_synth_RluC/D.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
IPR002942. S4_RNA-bd.
[Graphical view]
PfamiPF00849. PseudoU_synth_2. 1 hit.
PF01479. S4. 1 hit.
[Graphical view]
SMARTiSM00363. S4. 1 hit.
[Graphical view]
SUPFAMiSSF55120. SSF55120. 1 hit.
TIGRFAMsiTIGR00005. rluA_subfam. 1 hit.
PROSITEiPS01129. PSI_RLU. 1 hit.
PS50889. S4. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1TZ05-1 [UniParc]FASTAAdd to Basket

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MTSENRITGQ FTVPPELSDK RLDQAAAELM PEHSRSRLQS WIKSGALTVN    50
GKSRKPRDKV MMGDSLALDA EPEVQVTWEA EPISLDIVYE DEHLLVINKP 100
AGLVVHPAAG HTDGTLVNAL LNYAPEVENL PRAGIVHRLD KDTSGIMVVA 150
RSLIAHTSLV DQLQTRTMGR EYEAVVVGAL TGGATVDAPI GRHPQDRKRM 200
AVVSSGKPAV THYRLLERFA AHTLVRCKLE SGRTHQIRVH MAHVRHPLVG 250
DPAYGGRLRL PKGTTEELRD VLAAFTRQAL HARQLTLEHP ETGEILSWEV 300
PLPEDMVHLI EALRKHAREL EERDF 325
Length:325
Mass (Da):36,099
Last modified:February 6, 2007 - v1
Checksum:i09144260A1B73932
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000514 Genomic DNA. Translation: ABM17974.1.
RefSeqiYP_958161.1. NC_008740.1.

Genome annotation databases

EnsemblBacteriaiABM17974; ABM17974; Maqu_0878.
GeneIDi4656080.
KEGGimaq:Maqu_0878.
PATRICi22456980. VBIMarAqu65105_1276.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000514 Genomic DNA. Translation: ABM17974.1 .
RefSeqi YP_958161.1. NC_008740.1.

3D structure databases

ProteinModelPortali A1TZ05.
SMRi A1TZ05. Positions 78-320.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 351348.Maqu_0878.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABM17974 ; ABM17974 ; Maqu_0878 .
GeneIDi 4656080.
KEGGi maq:Maqu_0878.
PATRICi 22456980. VBIMarAqu65105_1276.

Phylogenomic databases

eggNOGi COG0564.
HOGENOMi HOG000275919.
KOi K06180.
OMAi RDIVHGG.
OrthoDBi EOG6P070X.

Enzyme and pathway databases

BioCyci MHYD351348:GHYZ-892-MONOMER.

Family and domain databases

Gene3Di 3.10.290.10. 1 hit.
InterProi IPR020103. PsdUridine_synth_cat_dom.
IPR006225. PsdUridine_synth_RluC/D.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
IPR002942. S4_RNA-bd.
[Graphical view ]
Pfami PF00849. PseudoU_synth_2. 1 hit.
PF01479. S4. 1 hit.
[Graphical view ]
SMARTi SM00363. S4. 1 hit.
[Graphical view ]
SUPFAMi SSF55120. SSF55120. 1 hit.
TIGRFAMsi TIGR00005. rluA_subfam. 1 hit.
PROSITEi PS01129. PSI_RLU. 1 hit.
PS50889. S4. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome 1 of Marinobacter aquaeolei VT8."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J.
    , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Edwards K., Richardson P.
    Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700491 / DSM 11845 / VT8.

Entry informationi

Entry nameiA1TZ05_MARAV
AccessioniPrimary (citable) accession number: A1TZ05
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: May 14, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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