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Protein

Glycogen synthase

Gene

glgA

Organism
Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp. citrulli)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciACIT397945:GI5W-3020-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:Aave_2986
OrganismiAcidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp. citrulli)
Taxonomic identifieri397945 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAcidovorax
ProteomesiUP000002596: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 508508Glycogen synthasePRO_1000014336Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi397945.Aave_2986.

Structurei

3D structure databases

ProteinModelPortaliA1TRG5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiQQLYCKV.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

A1TRG5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKILFATSEC APLVKTGGLG DVSAALPPAI AALGHEVMLL MPAYADMPLQ
60 70 80 90 100
GNITGWHSLP AEGPWPAAQL LRVDRGGHEV PLLLLSCPQL YARGGSPYAS
110 120 130 140 150
AQGDHPDNAL RFGLLAHVAA RIGTPQSPCG WTADIVHAND WPTALAPLYL
160 170 180 190 200
RQFRDAAGPR GDAVARSMVT VHNLAFQGVF PMDWAQRLGI EDRHLGIEGA
210 220 230 240 250
EFWGQLSMLK AGLQYADAIT TVSPTYAREI QTPELGFGLD GVLRARAGRL
260 270 280 290 300
QGILNGIDTA LWNPSQDTLI PAPFSADRLE GKAACKAALR RTLGLAQDGD
310 320 330 340 350
RMLFGLVGRM TEQKGIDWVI GGAERLLRQG GQLAILGSGD PALESALRAL
360 370 380 390 400
AKRHPRHMHV TVGFDESLAH GIEAGSDSFL MPSRFEPCGL NQMYSQAYGT
410 420 430 440 450
PPVVTPTGGL ADSVTDADDP AGNGTGFVLR GSSQAAFDQA VGRALHLWKT
460 470 480 490 500
APDAWRRLQR NGMQRDFGWT ASARAYVQAY GAARNRAETR PQTASALSYR

EPRPAAEY
Length:508
Mass (Da):54,360
Last modified:February 6, 2007 - v1
Checksum:i76C98385279F7D48
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000512 Genomic DNA. Translation: ABM33553.1.
RefSeqiYP_971327.1. NC_008752.1.

Genome annotation databases

EnsemblBacteriaiABM33553; ABM33553; Aave_2986.
GeneIDi4668987.
KEGGiaav:Aave_2986.
PATRICi20681117. VBIAciCit38535_3036.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000512 Genomic DNA. Translation: ABM33553.1.
RefSeqiYP_971327.1. NC_008752.1.

3D structure databases

ProteinModelPortaliA1TRG5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi397945.Aave_2986.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABM33553; ABM33553; Aave_2986.
GeneIDi4668987.
KEGGiaav:Aave_2986.
PATRICi20681117. VBIAciCit38535_3036.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiQQLYCKV.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciACIT397945:GI5W-3020-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Acidovorax avenae subsp. citrulli AAC00-1."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M.
    , Hauser L., Kyrpides N., Kim E., Stahl D., Richardson P.
    Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AAC00-1.

Entry informationi

Entry nameiGLGA_ACIAC
AccessioniPrimary (citable) accession number: A1TRG5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: February 6, 2007
Last modified: March 4, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.