Reviewed, UniProtKB/Swiss-Prot A1TRG5 (GLGA_ACIAC)

Names and origin

Protein names

Recommended name:
    Glycogen synthase
    EC=2.4.1.21
Alternative name(s):
    Starch [bacterial glycogen] synthase

Gene names

Name:	glgA
Ordered Locus Names:	Aave_2986

Organism

Acidovorax avenae subsp. citrulli (strain AAC00-1) [Complete proteome] [HAMAP]

Taxonomic identifier

397945 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Acidovorax

Protein attributes

Sequence length	508 AA.
Sequence status	Complete.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose. HAMAP MF_00484
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
Biological process	Glycogen biosynthesis
Molecular function	Glycosyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	starch synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 508	508	Glycogen synthase HAMAP MF_00484		PRO_1000014336
Sites
	Binding site	15	1	ADP-glucose By similarity

Sequences

	Sequence		Length	Mass (Da)
	A1TRG5-1 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: 76C98385279F7D48	FASTA	508	54,360
	10 20 30 40 50 60 MKILFATSEC APLVKTGGLG DVSAALPPAI AALGHEVMLL MPAYADMPLQ GNITGWHSLP 70 80 90 100 110 120 AEGPWPAAQL LRVDRGGHEV PLLLLSCPQL YARGGSPYAS AQGDHPDNAL RFGLLAHVAA 130 140 150 160 170 180 RIGTPQSPCG WTADIVHAND WPTALAPLYL RQFRDAAGPR GDAVARSMVT VHNLAFQGVF 190 200 210 220 230 240 PMDWAQRLGI EDRHLGIEGA EFWGQLSMLK AGLQYADAIT TVSPTYAREI QTPELGFGLD 250 260 270 280 290 300 GVLRARAGRL QGILNGIDTA LWNPSQDTLI PAPFSADRLE GKAACKAALR RTLGLAQDGD 310 320 330 340 350 360 RMLFGLVGRM TEQKGIDWVI GGAERLLRQG GQLAILGSGD PALESALRAL AKRHPRHMHV 370 380 390 400 410 420 TVGFDESLAH GIEAGSDSFL MPSRFEPCGL NQMYSQAYGT PPVVTPTGGL ADSVTDADDP 430 440 450 460 470 480 AGNGTGFVLR GSSQAAFDQA VGRALHLWKT APDAWRRLQR NGMQRDFGWT ASARAYVQAY 490 500 GAARNRAETR PQTASALSYR EPRPAAEY

References

[1]

"Complete sequence of Acidovorax avenae subsp. citrulli AAC00-1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Kim E., Stahl D., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000512 Genomic DNA. Translation: ABM33553.1.
RefSeq	YP_971327.1.
3D structure databases
SMR	A1TRG5. Positions 1-482.
ModBase	Search...
Protein-protein interaction databases
STRING	A1TRG5.
Genome annotation databases
GeneID	4668987.
GenomeReviews	Gene locus Aave_2986 in contig CP000512_GR.
KEGG	aav:Aave_2986.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0297.
HOGENOM	HBG596384.
OMA	LPGYPAV.
PhylomeDB	A1TRG5.
Family and domain databases
HAMAP	MF_00484. Glycogen_synth. [Tree]
InterPro	IPR011835. GlgA. IPR001296. Glyco_trans_1. IPR013534. Starch_synth_cat_dom. [Graphical view]
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. glgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLGA_ACIAC

Accession

Primary (citable) accession number: A1TRG5

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	February 6, 2007
Last modified:	February 9, 2010
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)