Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module

Gene

Aave_2519

Organism
Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp. citrulli)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciACIT397945:G1G7T-2571-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase moduleImported
Gene namesi
Ordered Locus Names:Aave_2519Imported
OrganismiAcidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp. citrulli)Imported
Taxonomic identifieri397945 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAcidovorax
Proteomesi
  • UP000002596 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi397945.Aave_2519

Structurei

3D structure databases

ProteinModelPortaliA1TQ54
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini380 – 472DNA_LIGASE_A3InterPro annotationAdd BLAST93

Phylogenomic databases

eggNOGiENOG4105DQE Bacteria
COG1793 LUCA
COG3285 LUCA
HOGENOMiHOG000222509
KOiK01971
OMAiAMMVEDH
OrthoDBiPOG091H0AZ9

Family and domain databases

CDDicd04862 PaeLigD_Pol_like, 1 hit
InterProiView protein in InterPro
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR014146 LigD_ligase_dom
IPR014144 LigD_PE_domain
IPR014145 LigD_pol_dom
IPR012340 NA-bd_OB-fold
IPR014143 NHEJ_ligase_prk
IPR033651 PaeLigD_Pol-like
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF13298 LigD_N, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR02777 LigD_PE_dom, 1 hit
TIGR02778 ligD_pol, 1 hit
TIGR02779 NHEJ_ligase_lig, 1 hit
TIGR02776 NHEJ_ligase_prk, 1 hit
PROSITEiView protein in PROSITE
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

A1TQ54-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARRSRTSGT AQEAPRKAPQ KAPPDALADY ARKRDFRNTP EPGAEPGDAL
60 70 80 90 100
PRGALRFVVQ KHWASRLHYD FRLEIDGTMK SWAVPKGPSF DPRDKRMAVQ
110 120 130 140 150
VEDHPVAYNR FEGQIPARQY GAGRVIIWDK GYWVPLEDPA RAWRAGKLKF
160 170 180 190 200
ELHGHKLQGR WTLVRMHGRG NERQPPWLLI KERDGLERDA VEYSVVDALP
210 220 230 240 250
DSVKSLPDLP EPAPARGRQA PAPAASSPAR RTAARGKAAA SAPAPAPEPA
260 270 280 290 300
AGRTARAGTS PRPKKAALPA ALAPQLATLV DGPPTDLAEW MFELKFDGYR
310 320 330 340 350
ILARIEGGEV RLITRNGNDW THRMPGLARA VRALPVESGW IDGEIVVPDR
360 370 380 390 400
HGIPDFQALQ NAFESGRRPG RSAAGSPDDG AVDRSGLVFY VFDLPFLNGH
410 420 430 440 450
DLRGLPLAER RQALRTLVAE AGSDTVRFSD AFEASPGELI ASACRLGFEG
460 470 480 490 500
VIGKRVSSAY GSGRSADWIK LKCGQRQEFV IGGYTDPQGT RTGLGSLLLG
510 520 530 540 550
VHGDDGQLHY AGNVGSGFSE RTLTTLLGLL RSLAADRSPF AEGTQVGRKA
560 570 580 590 600
HWVKPQLLAE VAFAGWTQTR HVRQAVFRGL REDKPPREIV RETPAPAATV
610 620 630 640 650
AGPSPTPPAA PRPASSEATP SRARSTMTSR RTASAPSPAS PPSSLRVTHG
660 670 680 690 700
DRVIDAASGT TKLDLVRYYA LVAPLMMEHL RQRPVSVVRA PEGVGGELFF
710 720 730 740 750
QKHPEHGSVD GVRTLDPALD PGHPPLAEIA GPEGLPAWAQ MNTIEFHSWN
760 770 780 790 800
ARSDRIDRPD RMAFDLDPGE GVPWDKVQEA TTLMRVMLTE LGLPGFLKTS
810 820 830 840 850
GGKGLHVVVP IKRLYGWDAV KGFSQAVVQH MARTIPQLFV AKSGPRNRVG
860 870 880 890 900
KIFVDYLRNG FGATTVSAWS ARARPGLGIS VPLRWDELGA LSSSTEWTVA
910 920 930
TVEDRLREGN APWDGYAKAA VSITQAMKML GYEPPRGGR
Length:939
Mass (Da):102,005
Last modified:February 6, 2007 - v1
Checksum:i1952C9F33AA4DD6A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000512 Genomic DNA Translation: ABM33092.1
RefSeqiWP_011795619.1, NC_008752.1

Genome annotation databases

EnsemblBacteriaiABM33092; ABM33092; Aave_2519
KEGGiaav:Aave_2519

Similar proteinsi

Entry informationi

Entry nameiA1TQ54_ACIAC
AccessioniPrimary (citable) accession number: A1TQ54
Entry historyiIntegrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: March 28, 2018
This is version 69 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health