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A1TQ54

- A1TQ54_ACIAC

UniProt

A1TQ54 - A1TQ54_ACIAC

Protein
Submitted name:

ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module

Gene

Aave_2519

Organism
Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp. citrulli)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 48 (01 Oct 2014)
      Sequence version 1 (06 Feb 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciACIT397945:GI5W-2550-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase moduleImported
    Gene namesi
    Ordered Locus Names:Aave_2519Imported
    OrganismiAcidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp. citrulli)Imported
    Taxonomic identifieri397945 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAcidovorax
    ProteomesiUP000002596: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi397945.Aave_2519.

    Structurei

    3D structure databases

    ProteinModelPortaliA1TQ54.
    SMRiA1TQ54. Positions 643-928.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiNGLPDFQ.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A1TQ54-1 [UniParc]FASTAAdd to Basket

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    MARRSRTSGT AQEAPRKAPQ KAPPDALADY ARKRDFRNTP EPGAEPGDAL    50
    PRGALRFVVQ KHWASRLHYD FRLEIDGTMK SWAVPKGPSF DPRDKRMAVQ 100
    VEDHPVAYNR FEGQIPARQY GAGRVIIWDK GYWVPLEDPA RAWRAGKLKF 150
    ELHGHKLQGR WTLVRMHGRG NERQPPWLLI KERDGLERDA VEYSVVDALP 200
    DSVKSLPDLP EPAPARGRQA PAPAASSPAR RTAARGKAAA SAPAPAPEPA 250
    AGRTARAGTS PRPKKAALPA ALAPQLATLV DGPPTDLAEW MFELKFDGYR 300
    ILARIEGGEV RLITRNGNDW THRMPGLARA VRALPVESGW IDGEIVVPDR 350
    HGIPDFQALQ NAFESGRRPG RSAAGSPDDG AVDRSGLVFY VFDLPFLNGH 400
    DLRGLPLAER RQALRTLVAE AGSDTVRFSD AFEASPGELI ASACRLGFEG 450
    VIGKRVSSAY GSGRSADWIK LKCGQRQEFV IGGYTDPQGT RTGLGSLLLG 500
    VHGDDGQLHY AGNVGSGFSE RTLTTLLGLL RSLAADRSPF AEGTQVGRKA 550
    HWVKPQLLAE VAFAGWTQTR HVRQAVFRGL REDKPPREIV RETPAPAATV 600
    AGPSPTPPAA PRPASSEATP SRARSTMTSR RTASAPSPAS PPSSLRVTHG 650
    DRVIDAASGT TKLDLVRYYA LVAPLMMEHL RQRPVSVVRA PEGVGGELFF 700
    QKHPEHGSVD GVRTLDPALD PGHPPLAEIA GPEGLPAWAQ MNTIEFHSWN 750
    ARSDRIDRPD RMAFDLDPGE GVPWDKVQEA TTLMRVMLTE LGLPGFLKTS 800
    GGKGLHVVVP IKRLYGWDAV KGFSQAVVQH MARTIPQLFV AKSGPRNRVG 850
    KIFVDYLRNG FGATTVSAWS ARARPGLGIS VPLRWDELGA LSSSTEWTVA 900
    TVEDRLREGN APWDGYAKAA VSITQAMKML GYEPPRGGR 939
    Length:939
    Mass (Da):102,005
    Last modified:February 6, 2007 - v1
    Checksum:i1952C9F33AA4DD6A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000512 Genomic DNA. Translation: ABM33092.1.
    RefSeqiYP_970866.1. NC_008752.1.

    Genome annotation databases

    EnsemblBacteriaiABM33092; ABM33092; Aave_2519.
    GeneIDi4669152.
    KEGGiaav:Aave_2519.
    PATRICi20680181. VBIAciCit38535_2571.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000512 Genomic DNA. Translation: ABM33092.1 .
    RefSeqi YP_970866.1. NC_008752.1.

    3D structure databases

    ProteinModelPortali A1TQ54.
    SMRi A1TQ54. Positions 643-928.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 397945.Aave_2519.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABM33092 ; ABM33092 ; Aave_2519 .
    GeneIDi 4669152.
    KEGGi aav:Aave_2519.
    PATRICi 20680181. VBIAciCit38535_2571.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi NGLPDFQ.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci ACIT397945:GI5W-2550-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Acidovorax avenae subsp. citrulli AAC00-1."
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M.
      , Hauser L., Kyrpides N., Kim E., Stahl D., Richardson P.
      Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: AAC00-1Imported.

    Entry informationi

    Entry nameiA1TQ54_ACIAC
    AccessioniPrimary (citable) accession number: A1TQ54
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 6, 2007
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3