A1TKA2 (A1TKA2_ACIAC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RNA-binding S4 domain protein EMBL ABM31390.1

Gene names

Ordered Locus Names:

Aave_0792

Organism

Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp. citrulli) [Complete proteome] [HAMAP] EMBL ABM31390.1

Taxonomic identifier

397945 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Acidovorax › Acidovorax citrulli

Protein attributes

Sequence length	267 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pseudouridine synthesis Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro pseudouridine synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1TKA2 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: BEDA4F982F8D8C87	FASTA	267	29,354
	10 20 30 40 50 60 MHDLSPDGTG AGEAGHIRLS KRVAEMRGCS RREAEWLIEG GWVQVDGRMT EAPGARVRPD 70 80 90 100 110 120 QDVVVAQNAK AEEAPPVTLL LHKPAGWEAG IGHGPAGDPR QARSGGAPDA GTLLEPGRRY 130 140 150 160 170 180 VGDSPPVRVL QRHFRQQECF TPLADAASGL VVYTQDRRMA RRLAEDIELL EQECIATVDG 190 200 210 220 230 240 RIAEGGLERL CRGLEFNGRP LPPAKVSWQS ETRLRFALKG IRPGQIPAMC EAVGLQVTAL 250 260 KRLRIGRVSL ARVPEGQWRY LLPWERF

References

[1]

"Complete sequence of Acidovorax avenae subsp. citrulli AAC00-1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Kim E., Stahl D., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AAC00-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000512 Genomic DNA. Translation: ABM31390.1.
RefSeq	YP_969164.1. NC_008752.1.
3D structure databases
ProteinModelPortal	A1TKA2.
ModBase	Search...
Protein-protein interaction databases
STRING	397945.Aave_0792.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABM31390; ABM31390; Aave_0792.
GeneID	4669710.
KEGG	aav:Aave_0792.
PATRIC	20676609. VBIAciCit38535_0810.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1187.
HOGENOM	HOG000044956.
KO	K06182.
OMA	GGWVTVD.
ProtClustDB	CLSK732241.
Enzyme and pathway databases
BioCyc	ACIT397945:GI5W-857-MONOMER.
Family and domain databases
Gene3D	3.10.290.10. 1 hit.
InterPro	IPR020103. PsdUridine_synth_cat_dom. IPR002942. S4_RNA-bd. [Graphical view]
Pfam	PF01479. S4. 1 hit. [Graphical view]
SMART	SM00363. S4. 1 hit. [Graphical view]
SUPFAM	SSF55120. PsdUridine_synth_cat_dom. 1 hit.
PROSITE	PS50889. S4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1TKA2_ACIAC

Accession

Primary (citable) accession number: A1TKA2

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	May 1, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)