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A1TJ44 (A1TJ44_ACIAC) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Aave_0375 EMBL ABM30982.1
OrganismAcidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp. citrulli) [Complete proteome] [HAMAP] EMBL ABM30982.1
Taxonomic identifier397945 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAcidovorax

Protein attributes

Sequence length566 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A1TJ44 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 9D4D0537A5099B91

FASTA56662,308
        10         20         30         40         50         60 
MKDFAALYRA LDASTSSLAK QAALQAYLRA AAPADAAWAV YFLAGGKPRQ LVPTKLLRQF 

        70         80         90        100        110        120 
AREAAGLPEW LFDESYEAVG DLAETIALLL PAPAEAHALG LAEWVEQHLL PLRGMAPEAL 

       130        140        150        160        170        180 
EPMLRAQWNR LAPEERLVYF KLITGAFRVG VSKLQVTQAL AAVSGVDPKR VAQRLMGYTH 

       190        200        210        220        230        240 
IGARPGPADY ERLVAPLAET GQGAADDAAQ SGETSGHPYP FFLAHPLSLP VDQFAATLGP 

       250        260        270        280        290        300 
PGGWIVEWKW DGIRAQLVRR AGATWVWSRG EELVSDRFPE LQRLGQEALP DGTVLDGEIV 

       310        320        330        340        350        360 
VWQHAEGDAP ARVRPFADLQ KRIGRKTLGP KLLRELPVVL LAYDLLEEDG KDLRALPQHE 

       370        380        390        400        410        420 
RRARLDALLA RVSHPALVAS PLLHGHDWDE LAARRAHARS LGVEGMMLKA RDAQYGVGRT 

       430        440        450        460        470        480 
KDVGTWWKWK IDPLSVDAVL IYAQRGHGRR ASLYSDYTFA VWDGPPGAEG RSLVPFAKAY 

       490        500        510        520        530        540 
SGLTDAEMAR VDAVIRRTTV ETFGPVRSVK PTLVFELGFE GIARSARHKS GIAVRFPRML 

       550        560 
RWREDKPVEE ADSLETLEAL LPRSDP 

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References

[1]"Complete sequence of Acidovorax avenae subsp. citrulli AAC00-1."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., Stahl D., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AAC00-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000512 Genomic DNA. Translation: ABM30982.1.
RefSeqYP_968756.1. NC_008752.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING397945.Aave_0375.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM30982; ABM30982; Aave_0375.
GeneID4665885.
KEGGaav:Aave_0375.
PATRIC20675777. VBIAciCit38535_0396.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMAWIRQNTI.
OrthoDBEOG6Q8HXT.
ProtClustDBPRK09247.

Enzyme and pathway databases

BioCycACIT397945:GI5W-375-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1TJ44_ACIAC
AccessionPrimary (citable) accession number: A1TJ44
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: November 13, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)