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A1TJ44

- A1TJ44_ACIAC

UniProt

A1TJ44 - A1TJ44_ACIAC

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Protein
Submitted name: ATP dependent DNA ligase
Gene
Aave_0375
Organism
Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp. citrulli)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciACIT397945:GI5W-375-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Aave_0375Imported
OrganismiAcidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp. citrulli)Imported
Taxonomic identifieri397945 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAcidovorax
ProteomesiUP000002596: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi397945.Aave_0375.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiRVWLWSR.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1TJ44-1 [UniParc]FASTAAdd to Basket

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MKDFAALYRA LDASTSSLAK QAALQAYLRA AAPADAAWAV YFLAGGKPRQ    50
LVPTKLLRQF AREAAGLPEW LFDESYEAVG DLAETIALLL PAPAEAHALG 100
LAEWVEQHLL PLRGMAPEAL EPMLRAQWNR LAPEERLVYF KLITGAFRVG 150
VSKLQVTQAL AAVSGVDPKR VAQRLMGYTH IGARPGPADY ERLVAPLAET 200
GQGAADDAAQ SGETSGHPYP FFLAHPLSLP VDQFAATLGP PGGWIVEWKW 250
DGIRAQLVRR AGATWVWSRG EELVSDRFPE LQRLGQEALP DGTVLDGEIV 300
VWQHAEGDAP ARVRPFADLQ KRIGRKTLGP KLLRELPVVL LAYDLLEEDG 350
KDLRALPQHE RRARLDALLA RVSHPALVAS PLLHGHDWDE LAARRAHARS 400
LGVEGMMLKA RDAQYGVGRT KDVGTWWKWK IDPLSVDAVL IYAQRGHGRR 450
ASLYSDYTFA VWDGPPGAEG RSLVPFAKAY SGLTDAEMAR VDAVIRRTTV 500
ETFGPVRSVK PTLVFELGFE GIARSARHKS GIAVRFPRML RWREDKPVEE 550
ADSLETLEAL LPRSDP 566
Length:566
Mass (Da):62,308
Last modified:February 6, 2007 - v1
Checksum:i9D4D0537A5099B91
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000512 Genomic DNA. Translation: ABM30982.1.
RefSeqiYP_968756.1. NC_008752.1.

Genome annotation databases

EnsemblBacteriaiABM30982; ABM30982; Aave_0375.
GeneIDi4665885.
KEGGiaav:Aave_0375.
PATRICi20675777. VBIAciCit38535_0396.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000512 Genomic DNA. Translation: ABM30982.1 .
RefSeqi YP_968756.1. NC_008752.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 397945.Aave_0375.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABM30982 ; ABM30982 ; Aave_0375 .
GeneIDi 4665885.
KEGGi aav:Aave_0375.
PATRICi 20675777. VBIAciCit38535_0396.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi RVWLWSR.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci ACIT397945:GI5W-375-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Acidovorax avenae subsp. citrulli AAC00-1."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M.
    , Hauser L., Kyrpides N., Kim E., Stahl D., Richardson P.
    Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AAC00-1.

Entry informationi

Entry nameiA1TJ44_ACIAC
AccessioniPrimary (citable) accession number: A1TJ44
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: May 14, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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