A1TJ44 (A1TJ44_ACIAC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ABM30982.1

Gene names

Ordered Locus Names:

Aave_0375

Organism

Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp. citrulli) [Complete proteome] [HAMAP] EMBL ABM30982.1

Taxonomic identifier

397945 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Acidovorax › Acidovorax citrulli

Protein attributes

Sequence length	566 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABM30982.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1TJ44 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: 9D4D0537A5099B91	FASTA	566	62,308
	10 20 30 40 50 60 MKDFAALYRA LDASTSSLAK QAALQAYLRA AAPADAAWAV YFLAGGKPRQ LVPTKLLRQF 70 80 90 100 110 120 AREAAGLPEW LFDESYEAVG DLAETIALLL PAPAEAHALG LAEWVEQHLL PLRGMAPEAL 130 140 150 160 170 180 EPMLRAQWNR LAPEERLVYF KLITGAFRVG VSKLQVTQAL AAVSGVDPKR VAQRLMGYTH 190 200 210 220 230 240 IGARPGPADY ERLVAPLAET GQGAADDAAQ SGETSGHPYP FFLAHPLSLP VDQFAATLGP 250 260 270 280 290 300 PGGWIVEWKW DGIRAQLVRR AGATWVWSRG EELVSDRFPE LQRLGQEALP DGTVLDGEIV 310 320 330 340 350 360 VWQHAEGDAP ARVRPFADLQ KRIGRKTLGP KLLRELPVVL LAYDLLEEDG KDLRALPQHE 370 380 390 400 410 420 RRARLDALLA RVSHPALVAS PLLHGHDWDE LAARRAHARS LGVEGMMLKA RDAQYGVGRT 430 440 450 460 470 480 KDVGTWWKWK IDPLSVDAVL IYAQRGHGRR ASLYSDYTFA VWDGPPGAEG RSLVPFAKAY 490 500 510 520 530 540 SGLTDAEMAR VDAVIRRTTV ETFGPVRSVK PTLVFELGFE GIARSARHKS GIAVRFPRML 550 560 RWREDKPVEE ADSLETLEAL LPRSDP

References

[1]

"Complete sequence of Acidovorax avenae subsp. citrulli AAC00-1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Kim E., Stahl D., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AAC00-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000512 Genomic DNA. Translation: ABM30982.1.
RefSeq	YP_968756.1. NC_008752.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	397945.Aave_0375.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABM30982; ABM30982; Aave_0375.
GeneID	4665885.
KEGG	aav:Aave_0375.
PATRIC	20675777. VBIAciCit38535_0396.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000036007.
KO	K01971.
OMA	WIRQNTI.
ProtClustDB	PRK09247.
Enzyme and pathway databases
BioCyc	ACIT397945:GI5W-440-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1TJ44_ACIAC

Accession

Primary (citable) accession number: A1TJ44

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	May 1, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)