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A1TJ44

- A1TJ44_ACIAC

UniProt

A1TJ44 - A1TJ44_ACIAC

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Aave_0375

Organism
Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp. citrulli)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 50 (01 Oct 2014)
      Sequence version 1 (06 Feb 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciACIT397945:GI5W-375-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Aave_0375Imported
    OrganismiAcidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp. citrulli)Imported
    Taxonomic identifieri397945 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAcidovorax
    ProteomesiUP000002596: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi397945.Aave_0375.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiRVWLWSR.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A1TJ44-1 [UniParc]FASTAAdd to Basket

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    MKDFAALYRA LDASTSSLAK QAALQAYLRA AAPADAAWAV YFLAGGKPRQ    50
    LVPTKLLRQF AREAAGLPEW LFDESYEAVG DLAETIALLL PAPAEAHALG 100
    LAEWVEQHLL PLRGMAPEAL EPMLRAQWNR LAPEERLVYF KLITGAFRVG 150
    VSKLQVTQAL AAVSGVDPKR VAQRLMGYTH IGARPGPADY ERLVAPLAET 200
    GQGAADDAAQ SGETSGHPYP FFLAHPLSLP VDQFAATLGP PGGWIVEWKW 250
    DGIRAQLVRR AGATWVWSRG EELVSDRFPE LQRLGQEALP DGTVLDGEIV 300
    VWQHAEGDAP ARVRPFADLQ KRIGRKTLGP KLLRELPVVL LAYDLLEEDG 350
    KDLRALPQHE RRARLDALLA RVSHPALVAS PLLHGHDWDE LAARRAHARS 400
    LGVEGMMLKA RDAQYGVGRT KDVGTWWKWK IDPLSVDAVL IYAQRGHGRR 450
    ASLYSDYTFA VWDGPPGAEG RSLVPFAKAY SGLTDAEMAR VDAVIRRTTV 500
    ETFGPVRSVK PTLVFELGFE GIARSARHKS GIAVRFPRML RWREDKPVEE 550
    ADSLETLEAL LPRSDP 566
    Length:566
    Mass (Da):62,308
    Last modified:February 6, 2007 - v1
    Checksum:i9D4D0537A5099B91
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000512 Genomic DNA. Translation: ABM30982.1.
    RefSeqiYP_968756.1. NC_008752.1.

    Genome annotation databases

    EnsemblBacteriaiABM30982; ABM30982; Aave_0375.
    GeneIDi4665885.
    KEGGiaav:Aave_0375.
    PATRICi20675777. VBIAciCit38535_0396.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000512 Genomic DNA. Translation: ABM30982.1 .
    RefSeqi YP_968756.1. NC_008752.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 397945.Aave_0375.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABM30982 ; ABM30982 ; Aave_0375 .
    GeneIDi 4665885.
    KEGGi aav:Aave_0375.
    PATRICi 20675777. VBIAciCit38535_0396.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi RVWLWSR.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci ACIT397945:GI5W-375-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Acidovorax avenae subsp. citrulli AAC00-1."
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M.
      , Hauser L., Kyrpides N., Kim E., Stahl D., Richardson P.
      Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: AAC00-1Imported.

    Entry informationi

    Entry nameiA1TJ44_ACIAC
    AccessioniPrimary (citable) accession number: A1TJ44
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 6, 2007
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3