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A1TFW5 (A1TFW5_MYCVP) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length407 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. HAMAP-Rule MF_00455 RuleBase RU000609 SAAS SAAS001998

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00455 RuleBase RU000610

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00455 RuleBase RU000610.

Sequence similarities

Belongs to the xylose isomerase family. HAMAP-Rule MF_00455

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site651 By similarity HAMAP-Rule MF_00455
Active site681 By similarity HAMAP-Rule MF_00455
Metal binding1921Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2281Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2281Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2311Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2561Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2661Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2681Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3041Magnesium 1 By similarity HAMAP-Rule MF_00455

Sequences

Sequence LengthMass (Da)Tools
A1TFW5 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: C0E2CD3933F951C3

FASTA40744,346
        10         20         30         40         50         60 
MTVLESSRPV PDALSPRRED KFSFGLWTVG WPGVDPFGVA TRPALDAIEA VDRLAALGAY 

        70         80         90        100        110        120 
GLTFHDDDLF AFGSSDGERR RAIDRLTSAL SANGLVVPMV TTNLFTQPVF KDGGFTSNDR 

       130        140        150        160        170        180 
AVRRFALRKV LRNLDLAAEL GAQTFVMWGG REGGEYDSAK DVQAALERYR EALDVLCQYV 

       190        200        210        220        230        240 
IDQGSGIRFA IEPKPNEPRG DILLPTVGHA LAFIETLAHP EMVGVNPETG HEQMSGLNFT 

       250        260        270        280        290        300 
HGIAQALYSG KLFHIDLNGQ RGIKFDQDLV FGHGDLVNAF SLVDLLEHGG PDGGPAYDGP 

       310        320        330        340        350        360 
RHFDYKPSRT EDAEGVWASA AANMRMYLLL RQRAAAFRAD PDVREAMVAA KVAELRKPTL 

       370        380        390        400 
AAGETYADLL NDRSAYEEFD TGAYFGGKGC GFVALHQLAV EHLMGAR 

« Hide

References

[1]"Complete sequence of Mycobacterium vanbaalenii PYR-1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Singan V., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I.J., Miller C., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 7251 / PYR-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000511 Genomic DNA. Translation: ABM16065.1.
RefSeqYP_956071.1. NC_008726.1.

3D structure databases

ProteinModelPortalA1TFW5.
SMRA1TFW5. Positions 18-407.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING350058.Mvan_5294.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM16065; ABM16065; Mvan_5294.
GeneID4644684.
KEGGmva:Mvan_5294.
PATRIC18189001. VBIMycVan31953_5395.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2115.
HOGENOMHOG000022596.
KOK01805.
OMAFAVMTEV.
OrthoDBEOG62NX4R.

Enzyme and pathway databases

BioCycMVAN350058:GIWR-5343-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013453. XylA_actinobac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02631. xylA_Arthro. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1TFW5_MYCVP
AccessionPrimary (citable) accession number: A1TFW5
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: June 11, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)