A1T856 (A1T856_MYCVP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcriptional regulator, LacI family EMBL ABM13356.1

Gene names

Ordered Locus Names:

Mvan_2545

Organism

Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) [Complete proteome] [HAMAP] EMBL ABM13356.1

Taxonomic identifier

350058 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium › Mycobacterium vanbaalenii

Protein attributes

Sequence length	341 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH lacI-type DNA-binding domain. SAAS SAAS000843

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS000843 RuleBase RU000708
Ligand	DNA-binding SAAS SAAS000843 RuleBase RU000708
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1T856 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: 231AAFCCA6388CE4	FASTA	341	36,360
	10 20 30 40 50 60 MIPKQTVNMT DVARRSGVSI ASVSRALRGE SGVSAATRDR ILSAARELAY VVSPEASRLS 70 80 90 100 110 120 GGPTGRVGVI VPRVDAWFYS TILAGIADEF DTVGMDLILC TLPTSAARHR FFEALPLRRK 130 140 150 160 170 180 VDAAVVVSLP LSARERTRLD QLAVPTVFVG GHRTEDHRPW VGIDDERAAQ QAVGHLLRIG 190 200 210 220 230 240 HHDIAMIQAA DDTDIPWATD QARIRGFHQT MQEAGLADPT VVTVKWSVDG GSHGMETLLS 250 260 270 280 290 300 RSRPPTAVFC HSDEIALGAL RTLRRSGISV PQQVSVIGVD DHPAAELSDL TTVAQPVREQ 310 320 330 340 GRIAARVVLG GLGDGDASGP PASVTTLPTR LVVRGSTAPP R

References

[1]

"Complete sequence of Mycobacterium vanbaalenii PYR-1." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Singan V., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I.J., Miller C., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 7251 / PYR-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000511 Genomic DNA. Translation: ABM13356.1.
RefSeq	YP_953362.1. NC_008726.1.
3D structure databases
ProteinModelPortal	A1T856.
ModBase	Search...
Protein-protein interaction databases
STRING	350058.Mvan_2545.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABM13356; ABM13356; Mvan_2545.
GeneID	4645426.
KEGG	mva:Mvan_2545.
PATRIC	18183353. VBIMycVan31953_2599.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1609.
HOGENOM	HOG000220179.
ProtClustDB	CLSK956766.
Enzyme and pathway databases
BioCyc	MVAN350058:GIWR-2563-MONOMER.
Family and domain databases
Gene3D	1.10.260.40. 1 hit.
InterPro	IPR010982. Lambda_DNA-bd_dom. IPR000843. Tscrpt_reg_HTH_LacI. [Graphical view]
Pfam	PF00356. LacI. 1 hit. [Graphical view]
SMART	SM00354. HTH_LACI. 1 hit. [Graphical view]
SUPFAM	SSF47413. Lambda_like_DNA. 1 hit.
PROSITE	PS00356. HTH_LACI_1. 1 hit. PS50932. HTH_LACI_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1T856_MYCVP

Accession

Primary (citable) accession number: A1T856

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	May 1, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)