A1T4S5 (A1T4S5_MYCVP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L15 HAMAP MF_01341 RuleBase RU003889

Gene names

Name:	rplO HAMAP MF_01341
Ordered Locus Names:	Mvan_1341

Organism

Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) [Complete proteome] [HAMAP]

Taxonomic identifier

350058 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium

Protein attributes

Sequence length	147 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds to the 23S rRNA By similarity. HAMAP MF_01341
Subunit structure	Part of the 50S ribosomal subunit By similarity. HAMAP MF_01341
Sequence similarities	Belongs to the ribosomal protein L15P family. HAMAP MF_01341 RuleBase RU003888

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding HAMAP MF_01341
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP MF_01341 RuleBase RU003888 EMBL ABM12175.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1T4S5 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: FBBB18E91C0CEAAC	FASTA	147	15,529
	10 20 30 40 50 60 MDPIKLHDLR PAPGEKKAKT RVGRGEGSKG KTAGRGTKGT KARKNVPVTF EGGQMPIHMR 70 80 90 100 110 120 LPKLKGFRNR FRTEYAPVNV GDIAKAFPEG GTVGVDELVA KGLVRKNVLV KVLGDGKLSA 130 140 KVDVTAHKFS GSAREAITAA GGTATEL

References

[1]

"Complete sequence of Mycobacterium vanbaalenii PYR-1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Singan V., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I.J., Miller C., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 7251 / PYR-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000511 Genomic DNA. Translation: ABM12175.1.
RefSeq	YP_952181.1. NC_008726.1.
3D structure databases
ProteinModelPortal	A1T4S5.
ModBase	Search...
Protein-protein interaction databases
STRING	A1T4S5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBMYCT00000080196; EBMYCP00000078149; EBMYCG00000080191.
GeneID	4643697.
GenomeReviews	Gene locus Mvan_1341 in contig CP000511_GR.
KEGG	mva:Mvan_1341.
PATRIC	18180901. VBIMycVan31953_1380.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0200.
GeneTree	EBGT00050000017661.
HOGENOM	HBG727142.
OMA	RKGRGHA.
ProtClustDB	PRK05592.
Family and domain databases
HAMAP	MF_01341_B. Ribosomal_L15_B. [Tree]
InterPro	IPR005749. Ribosomal_L15_bac-type. IPR001196. Ribosomal_L15_CS. IPR021131. Ribosomal_L18e/L15P. [Graphical view]
KO	K02876.
PANTHER	PTHR12934. Ribosom_L15_bac. 1 hit.
Pfam	PF00828. Ribosomal_L18e. 1 hit. [Graphical view]
SUPFAM	SSF52080. Ribosomal_L18e/L15. 1 hit.
TIGRFAMs	TIGR01071. RplO_bact. 1 hit.
PROSITE	PS00475. RIBOSOMAL_L15. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1T4S5_MYCVP

Accession

Primary (citable) accession number: A1T4S5

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	December 14, 2011
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)