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A1T086 (UBIC_PSYIN) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Probable chorismate--pyruvate lyase
Short name=CL
Short name=CPL
EC=4.1.3.40
Gene names
Name:ubiC
Ordered Locus Names:Ping_3468
OrganismPsychromonas ingrahamii (strain 37) [Complete proteome] [HAMAP]
Taxonomic identifier357804 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Psychromonadaceae › Psychromonas

Protein attributes

Sequence length186 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway By similarity. HAMAP MF_01632

Catalytic activity

Chorismate = 4-hydroxybenzoate + pyruvate. HAMAP MF_01632

Pathway

Cofactor biosynthesis; ubiquinone biosynthesis. HAMAP MF_01632

Subcellular location

Cytoplasm By similarity HAMAP MF_01632.

Sequence similarities

Belongs to the ubiC family.

Ontologies

Keywords
   Biological processUbiquinone biosynthesis
   Cellular componentCytoplasm
   LigandPyruvate
   Molecular functionLyase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processubiquinone biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionchorismate lyase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 186186Probable chorismate--pyruvate lyase HAMAP MF_01632
PRO_0000292074

Sites

Binding site781Substrate By similarity
Binding site1161Substrate; via amide nitrogen By similarity

Sequences

Sequence LengthMass (Da)Tools
A1T086 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: CC6C59BE9B70FD49

FASTA18621,009
        10         20         30         40         50         60 
MDITITPLAS STLWSADITP TTCSENLLDW LLDQNSLTRK LQALSADFKV KVRQQVTLSH 

        70         80         90        100        110        120 
SKDLLSPYFS EENKVLVREV LLVCDNKPVV FAQTEIPFST LTDQQAKLAE IGTDSLGTFL 

       130        140        150        160        170        180 
FQDPSMRRDK IEVAQFPVYS AVHQLCIDLN QEVDFPLWGR RSLFYVNNKP LLVSEVFLPA 


SGIYLP

« Hide

References

[1]"Complete sequence of Psychromonas ingrahamii 37."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Ivanova N., Staley J., Richardson P.
Submitted (JAN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 37.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000510 Genomic DNA. Translation: ABM05151.1.
RefSeqYP_944750.1. NC_008709.1.

3D structure databases

ProteinModelPortalA1T086.
ModBaseSearch...

Protein-protein interaction databases

STRINGA1T086.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4625541.
GenomeReviewsGene locus Ping_3468 in contig CP000510_GR.
KEGGpin:Ping_3468.
PATRIC23072525. VBIPsyIng103130_3828.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3161.
HOGENOMHBG644467.
OMAGRTVIPQ.

Enzyme and pathway databases

BioCycPING357804:PING_3468-MONOMER.

Family and domain databases

HAMAPMF_01632. UbiC.
[Tree]
InterProIPR007440. Chorismate--pyruvate_lyase.
[Graphical view]
KOK03181.
PfamPF04345. Chor_lyase. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameUBIC_PSYIN
AccessionPrimary (citable) accession number: A1T086
Entry history
Integrated into UniProtKB/Swiss-Prot: June 26, 2007
Last sequence update: February 6, 2007
Last modified: January 25, 2012
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

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