Skip Header

Contribute Send feedback
Read comments (?) or add your own

A1SX87 (A1SX87_PSYIN) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=2.4.1.25 EMBL ABM04102.1
Gene names
Ordered Locus Names:Ping_2365
OrganismPsychromonas ingrahamii (strain 37) [Complete proteome] [HAMAP] EMBL ABM04102.1
Taxonomic identifier357804 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesPsychromonadaceaePsychromonas

Protein attributes

Sequence length732 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A1SX87 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 08E15AF603A323A0

FASTA73282,536
        10         20         30         40         50         60 
MTNSALNMFM ELKGIDPNFV DAWGKPAKIS DENIRNIINK MGYEADNDDS LTAHYLEQEK 

        70         80         90        100        110        120 
QHWLSLLPPV AIYEKHDTYT LDVCLPIDYV TDDLLYKITT EDKNDITQSL SAIKFPLIAV 

       130        140        150        160        170        180 
NEISDIEFQC YQIALILDLP FGYHSLSLYE QGNDEALATM SLIITPASCY TPKSIDQGKK 

       190        200        210        220        230        240 
VWGASVQLYC VKSEVNWGIG DFSDLKTLLK NTAETGGDFI GLNPIHALSP SQPKQASPYS 

       250        260        270        280        290        300 
PSSRKWLNIL YTDLTTVDEL KRNKALQTEI DSDQFQDQLT SLRETDWVDY EKVTALKLEI 

       310        320        330        340        350        360 
LKALFVTLND GSVASDNRLA SLQIYVDQKG ESLQQQASYD ALQFKFLAEN PDSWGWPSWP 

       370        380        390        400        410        420 
EAFQSFQSEG TQAWIKNNKD EVLFWCYCQW IAELQLEEAH QLAKSLGMTL GIYRDLAVGV 

       430        440        450        460        470        480 
GKSSSDIWAN RSLYCENISI GAPPDVLGPR GQSWGLPPIA PDQMIKAGYQ PFIDLLQSNM 

       490        500        510        520        530        540 
SHCGALRIDH VMALLRLWWV PENCTADKGA YIYYAVHDML NLLALESVRN KCLVIGEDLG 

       550        560        570        580        590        600 
TVPEGMDVLL KDAGVYSYKV FFFEVATDGG YISPSHYSEQ AMATLSTHDM PTIKGFWNCE 

       610        620        630        640        650        660 
DLHLGRELGL YPDPVAYQQL LENRIRCKQQ ILDSLHGHNR LPGDFPRDAY ITPMDKTLNF 

       670        680        690        700        710        720 
ALQTHLASGN SALLSLQLED FLEMDQPVNV PGTSDEYKNW QRKLSKNIEQ IFTDPDIKTL 

       730 
LNKLSQARNG QI 

« Hide

References

[1]"Complete sequence of Psychromonas ingrahamii 37."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Ivanova N., Staley J., Richardson P.
Submitted (JAN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 37.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000510 Genomic DNA. Translation: ABM04102.1.
RefSeqYP_943701.1. NC_008709.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGA1SX87.

Protein family/group databases

CAZyGH77. Glycoside Hydrolase Family 77.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4623699.
GenomeReviewsGene locus Ping_2365 in contig CP000510_GR.
KEGGpin:Ping_2365.
PATRIC23070017. VBIPsyIng103130_2606.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1640.
HOGENOMHBG686276.
OMADPFAPQG.
PhylomeDBA1SX87.

Enzyme and pathway databases

BioCycPING357804:PING_2365-MONOMER.

Family and domain databases

InterProIPR003385. Glyco_hydro_77.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits.
KOK00705.
PfamPF02446. Glyco_hydro_77. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
TIGRFAMsTIGR00217. MalQ. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1SX87_PSYIN
AccessionPrimary (citable) accession number: A1SX87
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: December 14, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)